Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00034705 |
| length | 875 |
| lncRNA type | retained_intron |
| GC content | 0.52 |
| exon number | 5 |
| gene id | XLOC_017463 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007131.7 |
| NCBI id | CM002904.2 |
| chromosome length | 55201332 |
| location | 34320635 ~ 34341183 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005856 | cytoskeleton | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-031222-2 | Predicted to be located in cytoplasm; cytoskeleton; and nucleus. Is expressed in several structures, including ectoderm; pronephric duct; pronephric mesoderm; sensory system; and solid lens vesicle. Human ortholog(s) of this gene implicated in immunodeficiency 70. Orthologous to human IVNS1ABP (influenza virus NS1A binding protein). |
| ensembl_id | ENSDART00000135889 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00034704 | lncRNA | upstream | 575 | 34334141 ~ 34337750 (+) | False | XLOC_017463 |
| TCONS_00036616 | lncRNA | upstream | 305128 | 34029836 ~ 34033197 (+) | True | XLOC_017460 |
| TCONS_00034689 | lncRNA | upstream | 363033 | 33959570 ~ 33975292 (+) | True | XLOC_017455 |
| TCONS_00034682 | lncRNA | upstream | 592431 | 33745467 ~ 33745894 (+) | True | XLOC_017451 |
| TCONS_00034681 | lncRNA | upstream | 593074 | 33744350 ~ 33745251 (+) | False | XLOC_017451 |
| TCONS_00034710 | lncRNA | downstream | 53197 | 34392779 ~ 34394003 (+) | True | XLOC_017465 |
| TCONS_00034724 | lncRNA | downstream | 265365 | 34604947 ~ 34608264 (+) | False | XLOC_017470 |
| TCONS_00034726 | lncRNA | downstream | 321973 | 34661555 ~ 34663198 (+) | True | XLOC_017471 |
| TCONS_00034727 | lncRNA | downstream | 323740 | 34663322 ~ 34664762 (+) | True | XLOC_017472 |
| TCONS_00036618 | lncRNA | downstream | 422161 | 34761743 ~ 34766443 (+) | True | XLOC_017475 |
| TCONS_00034702 | mRNA | upstream | 5219 | 34320635 ~ 34333106 (+) | False | XLOC_017463 |
| TCONS_00034700 | mRNA | upstream | 182717 | 34151685 ~ 34155608 (+) | False | XLOC_017462 |
| TCONS_00034701 | mRNA | upstream | 182730 | 34151686 ~ 34155595 (+) | True | XLOC_017462 |
| TCONS_00034699 | mRNA | upstream | 183397 | 34151670 ~ 34154928 (+) | False | XLOC_017462 |
| TCONS_00034698 | mRNA | upstream | 193416 | 34130714 ~ 34144909 (+) | True | XLOC_017461 |
| TCONS_00034706 | mRNA | downstream | 35153 | 34374735 ~ 34379656 (+) | True | XLOC_017464 |
| TCONS_00034707 | mRNA | downstream | 48843 | 34388425 ~ 34399442 (+) | False | XLOC_017465 |
| TCONS_00034708 | mRNA | downstream | 48859 | 34388441 ~ 34393138 (+) | False | XLOC_017465 |
| TCONS_00034709 | mRNA | downstream | 50614 | 34390196 ~ 34399004 (+) | False | XLOC_017465 |
| TCONS_00034711 | mRNA | downstream | 61133 | 34400715 ~ 34419523 (+) | True | XLOC_017466 |
| TCONS_00034653 | other | upstream | 1867871 | 32466886 ~ 32470454 (+) | True | XLOC_017433 |
| TCONS_00034652 | other | upstream | 1905858 | 32408887 ~ 32432467 (+) | True | XLOC_017432 |
| TCONS_00034641 | other | upstream | 2614828 | 31722252 ~ 31723497 (+) | True | XLOC_017426 |
| TCONS_00034640 | other | upstream | 2951154 | 31387055 ~ 31387171 (+) | True | XLOC_017425 |
| TCONS_00034636 | other | upstream | 3115298 | 31217539 ~ 31223027 (+) | True | XLOC_017422 |
| TCONS_00034740 | other | downstream | 603789 | 34943371 ~ 34955260 (+) | True | XLOC_017481 |
| TCONS_00034743 | other | downstream | 723224 | 35062806 ~ 35063981 (+) | True | XLOC_017485 |
| TCONS_00034756 | other | downstream | 940414 | 35279996 ~ 35288971 (+) | False | XLOC_017488 |
| TCONS_00034760 | other | downstream | 1042856 | 35382438 ~ 35382617 (+) | False | XLOC_017489 |
| TCONS_00034762 | other | downstream | 1083116 | 35422698 ~ 35422827 (+) | True | XLOC_017490 |
