Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00034845 |
| length | 805 |
| RNA type | nonsense_mediated_decay |
| GC content | 0.48 |
| exon number | 6 |
| gene id | XLOC_017535 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007131.7 |
| NCBI id | CM002904.2 |
| chromosome length | 55201332 |
| location | 38620666 ~ 38670696 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0044206 | UMP salvage | biological_process |
| GO:0044211 | CTP salvage | biological_process |
| GO:0009116 | nucleoside metabolic process | biological_process |
| GO:0016310 | phosphorylation | biological_process |
| GO:0016740 | transferase activity | molecular_function |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004849 | uridine kinase activity | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0016301 | kinase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-041014-345 | Predicted to enable ATP binding activity and uridine kinase activity. Predicted to be involved in CTP salvage and UMP salvage. Predicted to act upstream of or within nucleoside metabolic process and phosphorylation. Predicted to be active in cytoplasm. |
| ensembl_id | ENSDART00000144521 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00036644 | lncRNA | upstream | 21787 | 38590508 ~ 38598879 (+) | True | XLOC_017534 |
| TCONS_00036643 | lncRNA | upstream | 173419 | 38373672 ~ 38447247 (+) | True | XLOC_017530 |
| TCONS_00036641 | lncRNA | upstream | 482243 | 38128054 ~ 38138423 (+) | False | XLOC_017524 |
| TCONS_00036642 | lncRNA | upstream | 482243 | 38130452 ~ 38138423 (+) | False | XLOC_017524 |
| TCONS_00036406 | lncRNA | upstream | 483925 | 38131736 ~ 38136741 (+) | True | XLOC_017524 |
| TCONS_00036645 | lncRNA | downstream | 399169 | 39048059 ~ 39053466 (+) | False | XLOC_017541 |
| TCONS_00036646 | lncRNA | downstream | 399181 | 39048071 ~ 39059365 (+) | False | XLOC_017541 |
| TCONS_00034856 | lncRNA | downstream | 399224 | 39048114 ~ 39052699 (+) | False | XLOC_017541 |
| TCONS_00034857 | lncRNA | downstream | 400284 | 39049174 ~ 39195117 (+) | False | XLOC_017541 |
| TCONS_00036647 | lncRNA | downstream | 402690 | 39051580 ~ 39053466 (+) | True | XLOC_017541 |
| TCONS_00034842 | mRNA | upstream | 36505 | 38543319 ~ 38584161 (+) | False | XLOC_017533 |
| TCONS_00034843 | mRNA | upstream | 36970 | 38543346 ~ 38583696 (+) | False | XLOC_017533 |
| TCONS_00034841 | mRNA | upstream | 74848 | 38543314 ~ 38545818 (+) | False | XLOC_017533 |
| TCONS_00034844 | mRNA | upstream | 74848 | 38543542 ~ 38545818 (+) | True | XLOC_017533 |
| TCONS_00034840 | mRNA | upstream | 81672 | 38525567 ~ 38538994 (+) | True | XLOC_017532 |
| TCONS_00034848 | mRNA | downstream | 23004 | 38671894 ~ 38716529 (+) | True | XLOC_017536 |
| TCONS_00034849 | mRNA | downstream | 75685 | 38724575 ~ 38727396 (+) | False | XLOC_017537 |
| TCONS_00034850 | mRNA | downstream | 75689 | 38724579 ~ 38726062 (+) | False | XLOC_017537 |
| TCONS_00034851 | mRNA | downstream | 76772 | 38725662 ~ 38726083 (+) | True | XLOC_017537 |
| TCONS_00034853 | mRNA | downstream | 188348 | 38837238 ~ 38900420 (+) | True | XLOC_017539 |
| TCONS_00034825 | other | upstream | 500776 | 38113797 ~ 38119890 (+) | True | XLOC_017523 |
| TCONS_00034815 | other | upstream | 794530 | 37820990 ~ 37826136 (+) | False | XLOC_017519 |
| TCONS_00034779 | other | upstream | 2340502 | 36280048 ~ 36280164 (+) | True | XLOC_017499 |
| TCONS_00034762 | other | upstream | 3197839 | 35422698 ~ 35422827 (+) | True | XLOC_017490 |
| TCONS_00034760 | other | upstream | 3238049 | 35382438 ~ 35382617 (+) | False | XLOC_017489 |
| TCONS_00034852 | other | downstream | 126082 | 38774972 ~ 38775087 (+) | True | XLOC_017538 |
| TCONS_00034855 | other | downstream | 261351 | 38910241 ~ 39046180 (+) | True | XLOC_017540 |
| TCONS_00034862 | other | downstream | 683079 | 39331969 ~ 39332092 (+) | True | XLOC_017544 |
| TCONS_00034905 | other | downstream | 3984095 | 42632985 ~ 42633105 (+) | True | XLOC_017575 |
| TCONS_00034912 | other | downstream | 4357414 | 43006304 ~ 43009613 (+) | True | XLOC_017581 |
