Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00000327 |
| length | 1212 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 1 |
| gene id | XLOC_000184 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 14372680 ~ 14373891 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | description |
|---|---|
| ko04020 | Calcium signaling pathway |
| ko04024 | cAMP signaling pathway |
| ko04080 | Neuroactive ligand-receptor interaction |
| ko04728 | Dopaminergic synapse |
| ko04030 | G protein-coupled receptors |
| ensembl_id | ENSDART00000046874 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00003046 | lncRNA | upstream | 289581 | 13997130 ~ 14083099 (+) | True | XLOC_000177 |
| TCONS_00002818 | lncRNA | upstream | 890171 | 13481635 ~ 13482509 (+) | False | XLOC_000175 |
| TCONS_00002817 | lncRNA | upstream | 890171 | 13481635 ~ 13482509 (+) | True | XLOC_000175 |
| TCONS_00003045 | lncRNA | upstream | 890446 | 13479133 ~ 13482234 (+) | False | XLOC_000175 |
| TCONS_00002815 | lncRNA | upstream | 891144 | 13478337 ~ 13481536 (+) | False | XLOC_000175 |
| TCONS_00002819 | lncRNA | downstream | 233943 | 14607834 ~ 14609880 (+) | True | XLOC_000190 |
| TCONS_00003047 | lncRNA | downstream | 395610 | 14769501 ~ 14770654 (+) | False | XLOC_000202 |
| TCONS_00003048 | lncRNA | downstream | 395716 | 14769607 ~ 14770654 (+) | True | XLOC_000202 |
| TCONS_00003049 | lncRNA | downstream | 477731 | 14851622 ~ 15021422 (+) | True | XLOC_000203 |
| TCONS_00002820 | lncRNA | downstream | 699509 | 15073400 ~ 15073664 (+) | True | XLOC_000204 |
| TCONS_00000326 | mRNA | upstream | 7970 | 14348399 ~ 14364710 (+) | True | XLOC_000183 |
| TCONS_00000324 | mRNA | upstream | 65842 | 14283692 ~ 14306838 (+) | True | XLOC_000181 |
| TCONS_00000323 | mRNA | upstream | 118514 | 14253118 ~ 14254166 (+) | True | XLOC_000180 |
| TCONS_00000322 | mRNA | upstream | 214117 | 14073891 ~ 14158563 (+) | True | XLOC_000179 |
| TCONS_00000321 | mRNA | upstream | 345900 | 14020445 ~ 14026780 (+) | True | XLOC_000178 |
| TCONS_00000328 | mRNA | downstream | 8693 | 14382584 ~ 14404555 (+) | True | XLOC_000185 |
| TCONS_00000329 | mRNA | downstream | 32207 | 14406098 ~ 14416435 (+) | True | XLOC_000186 |
| TCONS_00000330 | mRNA | downstream | 58543 | 14432434 ~ 14442902 (+) | True | XLOC_000187 |
| TCONS_00000331 | mRNA | downstream | 80772 | 14454663 ~ 14464020 (+) | True | XLOC_000188 |
| TCONS_00000332 | mRNA | downstream | 92969 | 14466860 ~ 14488074 (+) | True | XLOC_000189 |
| TCONS_00000325 | other | upstream | 35367 | 14337211 ~ 14337313 (+) | True | XLOC_000182 |
| TCONS_00000318 | other | upstream | 1369613 | 13002978 ~ 13003067 (+) | True | XLOC_000173 |
| TCONS_00000315 | other | upstream | 1519417 | 12848061 ~ 12853263 (+) | False | XLOC_000171 |
| TCONS_00000316 | other | upstream | 1519667 | 12848072 ~ 12853013 (+) | True | XLOC_000171 |
| TCONS_00000309 | other | upstream | 1636646 | 12735920 ~ 12736034 (+) | True | XLOC_000169 |
| TCONS_00000334 | other | downstream | 299886 | 14673777 ~ 14673871 (+) | True | XLOC_000192 |
| TCONS_00000335 | other | downstream | 320670 | 14694561 ~ 14694655 (+) | True | XLOC_000193 |
| TCONS_00000336 | other | downstream | 327845 | 14701736 ~ 14701830 (+) | True | XLOC_000194 |
| TCONS_00000337 | other | downstream | 334985 | 14708876 ~ 14708970 (+) | True | XLOC_000195 |
| TCONS_00000338 | other | downstream | 342125 | 14716016 ~ 14716110 (+) | True | XLOC_000196 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000300_03972562_03976190.mRNA | True | 1666 | mRNA | 0.49 | 3 | CI01000300 | 3972562 ~ 3976225 (+) |
