Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00004192 |
| length | 959 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 2 |
| gene id | XLOC_002179 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 26834985 ~ 26837173 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | description |
|---|---|
| ZDB-GENE-091204-269 | Orthologous to several human genes including FAM89B (family with sequence similarity 89 member B). |
| ensembl_id | ENSDART00000147518 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00005716 | lncRNA | upstream | 48200 | 26786369 ~ 26786785 (+) | True | XLOC_002175 |
| TCONS_00004188 | lncRNA | upstream | 63308 | 26766385 ~ 26771677 (+) | True | XLOC_002174 |
| TCONS_00005715 | lncRNA | upstream | 205703 | 26628793 ~ 26629282 (+) | True | XLOC_002167 |
| TCONS_00004176 | lncRNA | upstream | 217380 | 26612321 ~ 26617605 (+) | False | XLOC_002166 |
| TCONS_00005714 | lncRNA | upstream | 270464 | 26564221 ~ 26564521 (+) | True | XLOC_002164 |
| TCONS_00005717 | lncRNA | downstream | 45529 | 26882702 ~ 26883139 (+) | True | XLOC_002181 |
| TCONS_00004206 | lncRNA | downstream | 136428 | 26973601 ~ 26976954 (+) | True | XLOC_002186 |
| TCONS_00005902 | lncRNA | downstream | 224588 | 27061761 ~ 27064405 (+) | False | XLOC_002190 |
| TCONS_00005903 | lncRNA | downstream | 224769 | 27061942 ~ 27064405 (+) | False | XLOC_002190 |
| TCONS_00005904 | lncRNA | downstream | 331953 | 27169126 ~ 27198982 (+) | True | XLOC_002193 |
| TCONS_00004191 | mRNA | upstream | 2941 | 26827113 ~ 26832044 (+) | True | XLOC_002178 |
| TCONS_00004190 | mRNA | upstream | 12795 | 26813710 ~ 26822190 (+) | True | XLOC_002177 |
| TCONS_00004189 | mRNA | upstream | 23588 | 26800213 ~ 26811397 (+) | True | XLOC_002176 |
| TCONS_00004187 | mRNA | upstream | 77499 | 26747755 ~ 26757486 (+) | True | XLOC_002173 |
| TCONS_00004185 | mRNA | upstream | 142338 | 26689262 ~ 26692647 (+) | False | XLOC_002172 |
| TCONS_00004193 | mRNA | downstream | 34313 | 26871486 ~ 26923821 (+) | False | XLOC_002180 |
| TCONS_00004194 | mRNA | downstream | 34578 | 26871751 ~ 26925497 (+) | False | XLOC_002180 |
| TCONS_00004195 | mRNA | downstream | 58969 | 26896142 ~ 26925511 (+) | False | XLOC_002180 |
| TCONS_00004196 | mRNA | downstream | 64049 | 26901222 ~ 26925511 (+) | True | XLOC_002180 |
| TCONS_00004197 | mRNA | downstream | 89481 | 26926654 ~ 26933031 (+) | False | XLOC_002182 |
| TCONS_00004170 | other | upstream | 528642 | 26306229 ~ 26306343 (+) | True | XLOC_002162 |
| TCONS_00004166 | other | upstream | 870586 | 25964284 ~ 25964399 (+) | True | XLOC_002158 |
| TCONS_00004165 | other | upstream | 874237 | 25948242 ~ 25960748 (+) | True | XLOC_002157 |
| TCONS_00004149 | other | upstream | 2162056 | 24668774 ~ 24672929 (+) | False | XLOC_002143 |
| TCONS_00004147 | other | upstream | 2170536 | 24660142 ~ 24664449 (+) | False | XLOC_002143 |
| TCONS_00004210 | other | downstream | 226001 | 27063174 ~ 27063257 (+) | False | XLOC_002190 |
| TCONS_00004211 | other | downstream | 226181 | 27063354 ~ 27063438 (+) | True | XLOC_002190 |
| TCONS_00004216 | other | downstream | 1323124 | 28160297 ~ 28162247 (+) | True | XLOC_002194 |
| TCONS_00004217 | other | downstream | 1415505 | 28252678 ~ 28252795 (+) | True | XLOC_002196 |
| TCONS_00004234 | other | downstream | 2429618 | 29266791 ~ 29268413 (+) | True | XLOC_002204 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000304_12489630_12490940.mRNA | True | 1133 | mRNA | 0.41 | 2 | CI01000304 | 12489582 ~ 12491500 (+) |
