RNA id: TCONS_00045571


Basic Information

Item Value
RNA id TCONS_00045571
length 1574
RNA type mRNA
GC content 0.47
exon number 3
gene id XLOC_022927
representative True

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 22039964 ~ 22059801 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ACTGGACTAATAGTGGCGTGCTACCAAGGCTATGTGGATGTAGTGATGGCTCTCTCCCAGTGTCCTCATCTGGATGTGAACTGGTCAGACAACGAGGGCAACACAGCCCTCATCACTGCTTCCCAGGCAGGTCACATCACAATCTGTAACTACCTACTCAACTATTTTCCTGGGCTTGACATCGAGAAGAGGAACTGCCATGGTTTCAGCGCTCTGATGAAAGCTGCTATGCAGGGTCGAGTGGAGTGTGTCAAAGCACTGATGATGGCAGGGGCTGATTTGGAAGCAAGGGACAACGGGCGGAAGTTCACAGCTCGAGAGTGGGCCATCTTCACCAGCCGACACGAGACCGTCTTAACCATTATGCGGCTCATGCATCAGCCATGTGCAGATCAGTTCTGTGACAGCTATCGACCCGAATGGCCCCTTCTACCCGCACTGGTGGCCAAAGCACAGGCTCCCAAAGGCTGCATCCAAAAAATCTCAGAGACACTACGCGACTTCTTTGACATCAGCAACGTCACGGAGGCTTCAGAGGACGGTGTTCTCGATCACATGGTACGCATGACCACAGCGCTAGGCAGTCCATTCATTGCGACGTCATGTCGAACGGTGTGTCCTGGCAGCCCACCATGTGTGGGCAAACGTCGTTATGCTGTTCAGGAGATATTAAAAAAGCGACGCATTGAGCAGCTTAAAATACTCGGACCTGAACGCATCGAGAACTATAAACGTCTTTTTCAGAACTCCCGCGTCCTGCTGGTGCCCAAACCGAAAGATCGGCGAGCGAGTTTACAGCCTAATGCTCAAGCAGAGGATTCATCCACACTGACCATCCGCAGGACCAGTCTACTGCCATTACACCTGCTGAGGAGGAGCAGCGTCAGACCAGGTCTGGTGGTGCCCAAAGTGAGGATCACCAAGGCTCCGACTCCAACCTATGTGCCGGAGAGAGTGCGGCGGAAAAGCAGCTGTGTAGAAGAACAGTTCCTTCAGATCCCCAAGTGGAGATACAAAGAACTGAAAGAAGAGCGAAAGAAAGCAGAAGAGGCGGAAAGGAAAAGACTGGAGGCCATAACGAAAAGACAGCTCACCACTGGCAAGAGGAAATAAGTGTTTGCAAATATACTACTCACCATTTGATACTTGAAATGCTTATGTTAGATtgcgatttatttttattacctatttattatatttttgatagtTAAAGGCTTCTAAGctcctttttaaaatggggtTAATTGAATGGTTTAAAGGGAGCTGCTCTTTTAAGGGCCCTGACACACCAGAAAACTAGCGACGTCACTTGTTTTCAGTTGCAAACTGGGTGAAACTTTACACTAAAAAGAGGAGTCATTTGGCTCCACTTCCTTCCATTGTAGAAAAGTGAAACCAAAATAGTTGTTTTGCATGTTGATCACACCAATGATGTCATTTGGAGCCTGAATCTTTGATGTAATGAACATAAAGTGGAGCAGTGGTCATAGCCCAGCCCAAGCCAAATCGCAATCGCATGAAATAAGTAACTATAAAAATAGACATTAAAAAACAATGGACTATACATTAGCAAG

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-040724-39 Orthologous to human ANKRD33B (ankyrin repeat domain 33B).

Ensembl:

ensembl_id ENSDART00000132390

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00046969 lncRNA upstream 172414 21882945 ~ 21883972 (+) True XLOC_022924
TCONS_00045566 lncRNA upstream 325511 21730091 ~ 21730875 (+) True XLOC_022923
TCONS_00045553 lncRNA upstream 553817 21501859 ~ 21502569 (+) True XLOC_022915
TCONS_00046804 lncRNA upstream 748372 21307567 ~ 21308014 (+) True XLOC_022913
TCONS_00045547 lncRNA upstream 876843 21174928 ~ 21179543 (+) True XLOC_022910
TCONS_00046970 lncRNA downstream 9055 22068856 ~ 22071276 (+) True XLOC_022928
TCONS_00045573 lncRNA downstream 425909 22485710 ~ 22486773 (+) False XLOC_022930
TCONS_00045574 lncRNA downstream 425909 22485710 ~ 22488167 (+) False XLOC_022930
TCONS_00045576 lncRNA downstream 664523 22724324 ~ 22737860 (+) True XLOC_022931
TCONS_00046971 lncRNA downstream 1170244 23230045 ~ 23230743 (+) True XLOC_022935
TCONS_00045568 mRNA upstream 25307 22021675 ~ 22031079 (+) False XLOC_022926
TCONS_00045569 mRNA upstream 25518 22022109 ~ 22030868 (+) True XLOC_022926
TCONS_00045567 mRNA upstream 77542 21973929 ~ 21978844 (+) True XLOC_022925
TCONS_00045564 mRNA upstream 307686 21720321 ~ 21748700 (+) False XLOC_022923
TCONS_00045563 mRNA upstream 331392 21720304 ~ 21724994 (+) False XLOC_022923
TCONS_00045575 mRNA downstream 425909 22485710 ~ 22488740 (+) True XLOC_022930
TCONS_00045577 mRNA downstream 699650 22759451 ~ 22769996 (+) True XLOC_022932
TCONS_00045579 mRNA downstream 1142744 23202545 ~ 23214258 (+) True XLOC_022934
TCONS_00045580 mRNA downstream 1657117 23716918 ~ 23725371 (+) True XLOC_022937
TCONS_00045581 mRNA downstream 1670260 23730061 ~ 23740899 (+) True XLOC_022938
TCONS_00045565 other upstream 307686 21720480 ~ 21748700 (+) False XLOC_022923
TCONS_00045559 other upstream 426546 21629725 ~ 21629840 (+) True XLOC_022919
TCONS_00045555 other upstream 521954 21530004 ~ 21534432 (+) True XLOC_022916
TCONS_00045551 other upstream 783658 21272612 ~ 21272728 (+) True XLOC_022912
TCONS_00045533 other upstream 1268102 20788168 ~ 20788284 (+) True XLOC_022903
TCONS_00045572 other downstream 397043 22456844 ~ 22456961 (+) True XLOC_022929
TCONS_00045578 other downstream 1029588 23089389 ~ 23089505 (+) True XLOC_022933
TCONS_00045587 other downstream 1781883 23841684 ~ 23932525 (+) True XLOC_022942
TCONS_00045597 other downstream 2395831 24455632 ~ 24455748 (+) True XLOC_022952
TCONS_00045600 other downstream 2667157 24726958 ~ 24730970 (+) False XLOC_022954

Expression Profile

//