RNA id: XM_036955408.1


Basic Information

Item Value
RNA id XM_036955408.1
length 2077
RNA type mRNA
GC content 0.55
exon number 8
gene id wdr32
representative True

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 65045411 ~ 65070228 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TTTttgttgggggggtgggggggtggggattGTCTTAACGGAGTAGAGGTAAGGTGTATTCGAGATACAATAATTGCACAATTCGTTGTTGAACCGAGACACTATCTGTGAAACAAGGGGCCTGCACAGGCACCCGTTGGCGATAACAGCCACAATGAGCTCGGAGCAGCAGAGCGACGGCGTGGACCCGGACGAGTCGCAGGACACGTCCAGCAGCCGGGTGTCGGACAAGGAACAGGACCCGCAGACAGATGATTCCGCCGATGAAGACAAGACACCGGCGCGTCCTCCGCAGAGCAGCCGAGAGGAGAGTAGTCTTCACCCGAGAAGCTCCAGGGCGGATTCTGCAGCCGCGCAGGACAATCCCCGGTGTCAGCCGAATGTACAAGGCGCCTCGGGGCAAGGGAGGGGTACCTCTATGGCTGGCCCTGGTTCGGTTGAGAGTAGCTCCAACAGCCTGTTCTCCATGCTACAGAGCAGGACTATAAGGAGAGGGCTGTTCGTGGATCCATCTAGAGATAACTTTAGGACAATGACGAACTTGTATTCTTCCATGAGTCCGGCTGCAGACTCGGTCAATCTCAGTACCCAAACTCATGGCGCAGTGTTCAATTTGGAATACTCCCCCGACGGGTCTGTCCTGACAGTGGCCTGTGAACAGACGGAGGTTCTCCTGTTCGATCCCATCTCTTCCAAGCACATCAAGACCCTGGTGGAGGCTCATGAAGACTGTGTCAATAACATCAGGTTTCTGGACAACCGTTTGTTTGCCACCTGTTCTGATGACACCACCATAGCTCTGTGGGACCTGAGGAAGCTCAACTCTAAAGTGTGCTCTCTGCACGGTCACGCCAGCTGGGTCAAGAACATAGAGTACGACACCAACACAAGACTCCTTGTCACCTCTGGCTTTGACGGAAACGTCATCACCTGGGACaccaacagGTTTACAGAGGATGGCTGCCCCCACAAGAAGTTCTTCCACACGCGCTACCTGATGAGAATGCGTCTGACTCCAGACTGTTCCAAGATGTTGATCTCCACTTCATCTGGCTACCTGCTGATCCTTCACGACCTGGACCTCACACAGTCTCTGGAGGTGGGCAGCTACCGTATGCTGCGGGCCAGACGCACCCCCCTCAGCTCAGATGGCTCAGCGTCTGCGTCGAGGTCAAGTGGAGCTCCTCGACAGGGTAACGACTCCAGCAAGATCCACCCTCACAGAGAAGgTCTCTCCCCCAGGAATAGTTTGGAGGTGTTGACTCCAGAGAtcccaggagagagagacagggggaactGCATCACGTCTCTCCAGCTTCACCCTAAAGGCTGGGCTGCCCTCATACGCTGCTCCTCCAACATGGATGACCAGGAGtggaCATGTGTGTATGAGTTCCAGGATGGCTCCCCTACACGTCCCCCCGTCTCCCCGCGCTGTTCTCTACGTCTGACCCACTACATCGAGGAGGCTAACGTGGGGAGGGGCTACATCAAGGAGTTGTGCTTCAGTCCTGACGGGCGGCTCATCTGCTCCCCCTACGGGTACGGAGTACGGCTGCTGTCCTTCGATGAGAACTGTATGGAGCTGTCTGACTGCCTTCCCGTCCAGACCAGCTGTCTCCGAGAGGTGCggtccatctactcccacagtgaTGTGGTCCTGACCACCAAGTTCTCCCCAACCCACTGCCAGCTGGCGTCAGGCTGTCTCAGTGGCCGCGTCGCCTTATACCAGCCCAGGTTCTAACAGCGGGGCTGTCCCGAATGGCCCcccccccctattccctatgggctctggtcaaaagtagtgcactattttagggaatagggtgccattttttgggggggacactCCGGTAATCAAGTAGACCTTTATTCATTAGGCGCCAAACGGAAGAAACCGGAAACGAAGGGACTACCTTGAACTTGGTTTTGCTACCGTTATACCCCGATGCAATGggcaccaaccttttctgagtcaagaacACTTTGTCAAAACCAACCCGAGCTCAACCGCCACAAcgtttattttaaaaaatgtaacattaACCTAATAAAAAGTTACATTTTCACAGCA

Function

GO: NA

KEGG:

id description
K11802 DCAF10; DDB1- and CUL4-associated factor 10

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1886595 lncRNA upstream 3364 65041750 ~ 65042048 (+) True G1648627
TU1886594 lncRNA upstream 5077 65040093 ~ 65040335 (+) True G1648626
TU1886584 lncRNA upstream 18159 65025344 ~ 65027253 (+) True G1648623
TU1886588 lncRNA upstream 18573 65024252 ~ 65026839 (+) False G1648623
TU1886587 lncRNA upstream 20311 65024252 ~ 65025101 (+) False G1648623
TU1886615 lncRNA downstream 18474 65088702 ~ 65089107 (+) True G1648645
TU1886618 lncRNA downstream 37709 65107937 ~ 65108190 (+) True G1648648
TU1886619 lncRNA downstream 50314 65120542 ~ 65120969 (+) True G1648649
TU1886624 lncRNA downstream 65136 65135364 ~ 65135760 (+) True G1648654
TU1886576 lncRNA downstream 73406 65143634 ~ 65144145 (+) True G1648617
XM_036955403.1 mRNA upstream 24813 64971235 ~ 65020599 (+) False LOC110498417
XM_036955404.1 mRNA upstream 24813 64971239 ~ 65020599 (+) False LOC110498417
XM_036955405.1 mRNA upstream 24813 64971240 ~ 65020599 (+) False LOC110498417
XM_036955406.1 mRNA upstream 24813 64971244 ~ 65020599 (+) True LOC110498417
XM_036955391.1 mRNA upstream 492498 64540297 ~ 64552914 (+) True LOC118941527
XM_036955409.1 mRNA downstream 7152 65077380 ~ 65103465 (+) True LOC110498306
XM_036955413.1 mRNA downstream 38457 65108685 ~ 65142820 (+) False manba
XM_036955410.1 mRNA downstream 38458 65108686 ~ 65142820 (+) False manba
XM_036955411.1 mRNA downstream 38458 65108686 ~ 65142820 (+) False manba
XM_036955412.1 mRNA downstream 38458 65108686 ~ 65142820 (+) True manba
TU1886551 other upstream 64469 64980364 ~ 64980943 (+) False G1648608
TU1886125 other upstream 916344 64128208 ~ 64129068 (+) True G1648296
TU1885128 other upstream 1653580 63391625 ~ 63391832 (+) False LOC110498409
TU1885075 other upstream 1841355 63202756 ~ 63204057 (+) False G1647477
TU1884975 other upstream 1968269 63075149 ~ 63077143 (+) True G1647411
TU1887705 other downstream 391545 65461773 ~ 65463454 (+) True G1649268
TU1887728 other downstream 474149 65544377 ~ 65545055 (+) True G1649291
TU1887755 other downstream 508211 65578439 ~ 65582582 (+) True G1649309
TU1887771 other downstream 530732 65600960 ~ 65602416 (+) True G1649319
TU1887742 other downstream 664386 65734614 ~ 65812816 (+) False LOC110498653

Expression Profile