RNA id: TU2376159


Basic Information

Item Value
RNA id TU2376159
length 452
RNA type TUCP
GC content 0.43
exon number 2
gene id G2078253
representative True

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 35870485 ~ 35871733 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ccattaggatgtccttctcagtaaccattaggatgtctttctcagtaaccattaggatgtccttctcagtaaccattaggatgtccttctcagtaaccatgaggatgtacttctcagtaaccatgaggatgtccttctcagtaaccatgaggatgtcattctcagtaaccatgaggatgtctttctcagtaaccattaggatgtccttctcagtaaccatgaggatgtccttctcagtaaccatgaggatgtccttctcagtaaccatgtcagtatccagggccattaggatgtccttctcagtaaccattagaatGTTCCTTCTGAGTAACAATatcagtatccagggccattaggatgtccttctcagtaaccattaggatgtacttctcagtaaccatgaggatgtccttctcagtaaccatgaggatgtccttctccgTAACCATGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2376157 lncRNA upstream 1682 35866876 ~ 35868803 (+) True G2078251
TU2376140 lncRNA upstream 19650 35845139 ~ 35850835 (+) False G2078240
TU2376141 lncRNA upstream 19650 35847001 ~ 35850835 (+) True G2078240
TU2376138 lncRNA upstream 30571 35839713 ~ 35839914 (+) True G2078238
TU2376068 lncRNA upstream 84289 35784458 ~ 35786196 (+) True G2078171
TU2376162 lncRNA downstream 2687 35874420 ~ 35876639 (+) True G2078255
TU2376201 lncRNA downstream 55365 35927098 ~ 35927438 (+) True G2078290
TU2376205 lncRNA downstream 59746 35931479 ~ 35931686 (+) True G2078294
TU2376206 lncRNA downstream 60079 35931812 ~ 35932026 (+) True G2078295
TU2376242 lncRNA downstream 91461 35963194 ~ 35963483 (+) True G2078331
XM_021588404.2 mRNA upstream 47601 35804534 ~ 35822884 (+) True LOC110507976
XM_036965549.1 mRNA upstream 351376 35465699 ~ 35519109 (+) False LOC110507975
XM_021588401.2 mRNA upstream 706026 35156006 ~ 35164459 (+) True LOC110507973
XM_036965275.1 mRNA upstream 759443 35014631 ~ 35111042 (+) False gucy1a2
XM_036965014.1 mRNA upstream 860681 34970520 ~ 35009804 (+) True cwf19l2
XM_036965202.1 mRNA downstream 133692 36005425 ~ 36012334 (+) False LOC110507977
XM_036965203.1 mRNA downstream 134300 36006033 ~ 36012334 (+) False LOC110507977
XM_036965204.1 mRNA downstream 134862 36006595 ~ 36012334 (+) True LOC110507977
XM_036965269.1 mRNA downstream 493922 36365655 ~ 36381011 (+) False naalad2
XM_036965270.1 mRNA downstream 493922 36365655 ~ 36381011 (+) False naalad2
TU2376088 other upstream 72495 35797572 ~ 35797990 (+) True G2078188
TU2375966 other upstream 177652 35684135 ~ 35692833 (+) True G2078087
TU2375601 other upstream 356972 35470330 ~ 35513513 (+) True G2077777
TU2375598 other upstream 362511 35465990 ~ 35507974 (+) True LOC110507975
TU2375336 other upstream 723816 35146144 ~ 35146669 (+) True G2077547
TU2376207 other downstream 60382 35932115 ~ 35932509 (+) True G2078296
TU2376308 other downstream 161552 36033285 ~ 36033999 (+) True G2078382
TU2376352 other downstream 231141 36102874 ~ 36104101 (+) True G2078425
TU2376423 other downstream 429205 36300938 ~ 36302042 (+) False G2078493
TU2376424 other downstream 429205 36300938 ~ 36302042 (+) False G2078493

Expression Profile