RNA id: XM_036965269.1


Basic Information

Item Value
RNA id XM_036965269.1
length 2556
RNA type mRNA
GC content 0.52
exon number 20
gene id naalad2
representative False

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36365655 ~ 36381011 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ctctctctctctctctttctctctctttgcttttCACACACATGCACTCCATTATCTTGTTGAATGCGTTCGGTGTTTCGGAGTGTTACCAAGCGGGACAATGAAAACCGAAAGCAGGCTCGTGCAGTGGATATGTTGGCTCATCGTTATAACGTCGTTTTTCCTGACCGGGTTTATAATAGGCTGGTTTGCAAGGCCCACCAGCACAGAAACAAGCCATGATGCAGGGTCCAGACGTCACCTGAGAGAGTTTCTGGATGAGATGCGACCAGAGAACATCAGAGATCATCTGAGgaAGTTCACCCGGTTACCCCACCTGGCCGGTACAGAGCAGAACCTCCAATTGGCTGAACAGATAAAAGGGGAGTGGCTAGCGTATGGTCTGGACTCAGTAGAGATGGTACCTTATGATGTGCTGCTGTCATACCCCAACATATCACAACCCAACTACATCTCTATAGTAGACGATCTGGGCAACGagaTGTTCAACACTTCTCTATCAGAGCCGGTTCCTGAGGGATATGAGAATGTCTCTGACATCGTTCCTCCCTACAGCGCCTTCTCAGCGCAGGGACAACCAGTgGGTGACCTGGTTTATGTGAACTATGGGCGTACAGAGGACTTCTTCCAgctggagagacagatggggatCAACGTCACTGGGAAGATCGTAATAGTCAGATATGGAAATATCTTCAGAGGAaacaagGTGAAGAATGCGATGCTTCATGGGGCGAGCGGTATAATCATGTTCTCAGACCCTGCAGATTACTGCGCCCCAGGAGTTCAGCCATACCCCGACGGGTGGAACCTTCCAGGTGGAGGGGCACAGAGGGGTAATGTCCTCAACCTGAATGGGGCAGGAGACCCCCTCACGCCAGGGTATCCTGCtaaagaATACACTTACAGGTACAACCTGGAGGAAGGGGTGGGGCTTCCTAAAATTCCAGTGCATCCTATTGGCTATCATGATGCCATCCAACTACTAAAGAATATGGGAGGAGACGTCCCACCCAATAACTGGAAGGGAGCGTTAAACGTGTCCTATCGGATTGGACCGGGCTTCACTGACGGCTTCAGTACACAGAAGGTGCGTATGAACATCCACACCAACAACCAGGTGACCCGGATATACAACGTCATCGGGAGGTTACGAGGGGCCGTGGAGCCAGACCGCTATGTGATCCTGGGGGGCCACCGAGATGCCTGGGTGTTCGGGGGGATCGACCCGGTAACGGGAGCTGCCGTGGTGCACGAGAGTGTAAGGAGCGCTGGGAAACTGCTCAGAaaagGCTGGAGGCCCAGGAGGTCCATAGTATTTGCCAGTTGGGATGCAGAGGAGTTTGGACTGCTGGGATCAACAGAGTGGGCTGAGGAAAACGCCAAAGTGCTGCAGGAGAGAGCAGTGGCTTACATCAATGCAGACTCAGCAATAGagggtatGTACACATTGAGGATAGACTGCAccccctctctccacaccttagTGTACGACATCACCAAACAGGTGTCTAGtccagaggagggagaggaggggttgtCTCTGTATGAGAGCTGGCACAAGCGCGACAACTGGACAGATGACCGCGATGCACCCCGgatCAGTAAGCTGGGTTCAGGCAGTGACTTTGAGGCGTATTTTATCCGACTGGGCATCGCAGCAGGCAGGGCCCGATACACCAAGAACAGGAAGACAGAGCGGTACAGCAGCTACCCAGTGTATCACAGTGTGTATGAGACCTTTGAGTTGGTGGAGAGGTTCTACGACCCTTCCTTCCGGAAGCTCAGAGCCGTAGCTCAGGTCAGGGGAGGCCTCATCTTCCTATTGGCTGATTCCCAGCTCCTCCCCCTGGATGCCAGTCAATACGCTGGCTCTCTGACAAAGTATGCCCACACCATCGCTCAGCTGGGACAAAAACACCCAGATGCTCTTGTGAAATACGGGGTATCATTCGATTCTCTGTTCTCTGCGGTGGAGAACTTCACTGTGGCTGCTAGGGACTTCCATGAGCGTCTCACCACTCTGGACAGGACAGACCCTATACAGATACGTATGGTCAATGACCAGCTAATGTACCTGGAGAGAGCCTTCGTGGACCCGCTAGGTTTACCTGGCCGACCATTCTACAGACATGTGATCTTTGCTCCCAGCAGTCATAATAAATATGCTGGCGAGTCCTTCCCTGGCATTTATGATGCGCTGTTTGACATCGAGCGTACAGCCAATCCCAAACAGGCGTGGGATGAAGTGAGGCGACAGATCAGCATCGCTGCGTTTACCGTCCAAGCTGCCGCCATGACACTCACACCTCCTGCCTAACGAAaagatctctctctcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagcaactgaGAAAGACACACCAGCCCTGCCTTACACTCCATGCTTTATCTGAGCCAGTAGTCTGAAGCCACATCCTCTCCCATCGCTATCTGGCTGCTTTTAGTAAAACTGCACcattttgaaaataaaaacagACTTTTAATGAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2376504 lncRNA upstream 11715 36352720 ~ 36353940 (+) True G2078530
TU2376502 lncRNA upstream 14009 36351323 ~ 36351646 (+) True G2078529
TU2376482 lncRNA upstream 60433 36304553 ~ 36305222 (+) True G2078515
TU2376429 lncRNA upstream 62991 36263506 ~ 36302664 (+) False G2078493
TU2376472 lncRNA upstream 69635 36295326 ~ 36296020 (+) True G2078509
TU2376527 lncRNA downstream 10379 36391390 ~ 36392076 (+) True G2078544
TU2376531 lncRNA downstream 26993 36408004 ~ 36411380 (+) True G2078548
TU2376550 lncRNA downstream 55175 36436186 ~ 36437921 (+) True G2078562
TU2376559 lncRNA downstream 71803 36452814 ~ 36453166 (+) True G2078571
TU2376560 lncRNA downstream 72298 36453309 ~ 36453542 (+) True G2078572
XM_036965202.1 mRNA upstream 353321 36005425 ~ 36012334 (+) False LOC110507977
XM_036965203.1 mRNA upstream 353321 36006033 ~ 36012334 (+) False LOC110507977
XM_036965204.1 mRNA upstream 353321 36006595 ~ 36012334 (+) True LOC110507977
XM_021588404.2 mRNA upstream 542771 35804534 ~ 35822884 (+) True LOC110507976
XM_036965549.1 mRNA upstream 846546 35465699 ~ 35519109 (+) False LOC110507975
XM_021588445.2 mRNA downstream 57214 36438225 ~ 36440709 (+) False LOC110508005
XM_036965056.1 mRNA downstream 72750 36453761 ~ 36546497 (+) False LOC110507218
XM_036965035.1 mRNA downstream 229724 36610735 ~ 36618726 (+) True LOC118944683
XM_036965308.1 mRNA downstream 297762 36678773 ~ 36703523 (+) True LOC118936607
XM_036965237.1 mRNA downstream 326915 36707926 ~ 36850018 (+) False LOC110507948
TU2376423 other upstream 63613 36300938 ~ 36302042 (+) False G2078493
TU2376424 other upstream 63613 36300938 ~ 36302042 (+) False G2078493
TU2376426 other upstream 63613 36300938 ~ 36302042 (+) False G2078493
TU2376427 other upstream 63613 36300938 ~ 36302042 (+) True G2078493
TU2376352 other upstream 261554 36102874 ~ 36104101 (+) True G2078425
TU2376553 other downstream 57364 36438375 ~ 36439354 (+) True LOC110508005
TU2377138 other downstream 892475 37273486 ~ 37276857 (+) True LOC110536894
TU2377335 other downstream 898094 37279105 ~ 37280832 (+) True G2079197
TU2377712 other downstream 985728 37366739 ~ 37368136 (+) True G2079468
TU2377942 other downstream 1434867 37815878 ~ 37819286 (+) False G2079657

Expression Profile