RNA id: TU2376426



Basic Information


Item Value
RNA id TU2376426
length 1027
RNA type TUCP
GC content 0.50
exon number 2
gene id G2078493
representative False

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36263506 ~ 36302664 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CCCCAGATATCAGCCCCTCTCTACTAGTCACTAGATGGCACTATAACCCCAGATATCAGCCTctccactacagacctgtagaTGGCGCTCTGCCCCTGCTCTGGGGGAGCACCAGCAGGTTTTTAAATagtacacacacagcacaccaaGAGAAGAAAGTTAAAAGACGGACCCAAGCCTCGGGCCTCAGCACAGGAGGTGCCATACAACCTCTCTACCCCTAGGCTCTACCGAGTCCCCAACAACCGGATGTTCcagttttcaggggaaatggaaagagagactTCCGCTTTTGGAcattaactcctcctccacatttactggattggttgaacagtgcagaagataACTTTTTCTTCTTGTCAAGACCAGTATGAGGGGGATCTAGTCTCAGGCgtttcttttacacctgctacaTTTGGTTACTCCACCCCTGATATCtaaccctgacctttaacccctagtCCCCAGGCTGACCTTGTGATGTAAGGCACACAGCAGCTCAGCGAACCAGTAGAAGGACTGCAGCTCCCTGCATACCCACACAAAGTATAGCCTCCTGAGACGGAAATGCCTCCAGCCATCcctgagacagaacacacacacacacacacacacacacacacacacacacacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacagacacacagacagacagacagacacacacagacagacagacagacagacacacagacagacagacagacagacagacagacagacagacagacagacacacagacacacagacagacagacagacagacagacagacagacagacagacagacagacagacacacacacagacagacagacagacagacagacagacagacagacagacagacagacagacacagacagacagacagacagacagacagacagacagacagacagacagacagacaga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2376472 lncRNA upstream 4918 36295326 ~ 36296020 (+) True G2078509
TU2376391 lncRNA upstream 120920 36179131 ~ 36180018 (+) True G2078461
TU2376384 lncRNA upstream 132442 36165327 ~ 36168496 (+) True G2078456
TU2376379 lncRNA upstream 141089 36159552 ~ 36159849 (+) True G2078451
TU2376375 lncRNA upstream 147810 36152817 ~ 36153128 (+) True G2078447
TU2376482 lncRNA downstream 2511 36304553 ~ 36305222 (+) True G2078515
TU2376502 lncRNA downstream 49281 36351323 ~ 36351646 (+) True G2078529
TU2376504 lncRNA downstream 50678 36352720 ~ 36353940 (+) True G2078530
TU2376527 lncRNA downstream 89348 36391390 ~ 36392076 (+) True G2078544
TU2376531 lncRNA downstream 105962 36408004 ~ 36411380 (+) True G2078548
XM_036965202.1 mRNA upstream 288604 36005425 ~ 36012334 (+) False LOC110507977
XM_036965203.1 mRNA upstream 288604 36006033 ~ 36012334 (+) False LOC110507977
XM_036965204.1 mRNA upstream 288604 36006595 ~ 36012334 (+) True LOC110507977
XM_021588404.2 mRNA upstream 478054 35804534 ~ 35822884 (+) True LOC110507976
XM_036965549.1 mRNA upstream 781829 35465699 ~ 35519109 (+) False LOC110507975
XM_036965269.1 mRNA downstream 63613 36365655 ~ 36381011 (+) False naalad2
XM_036965270.1 mRNA downstream 63613 36365655 ~ 36381011 (+) False naalad2
XM_036965271.1 mRNA downstream 63613 36365655 ~ 36381011 (+) True naalad2
XM_021588445.2 mRNA downstream 136183 36438225 ~ 36440709 (+) False LOC110508005
XM_036965056.1 mRNA downstream 151719 36453761 ~ 36546497 (+) False LOC110507218
TU2376352 other upstream 196837 36102874 ~ 36104101 (+) True G2078425
TU2376308 other upstream 266939 36033285 ~ 36033999 (+) True G2078382
TU2376207 other upstream 368429 35932115 ~ 35932509 (+) True G2078296
TU2376159 other upstream 429205 35870485 ~ 35871733 (+) True G2078253
TU2376088 other upstream 502948 35797572 ~ 35797990 (+) True G2078188
TU2376553 other downstream 136333 36438375 ~ 36439354 (+) True LOC110508005
TU2377138 other downstream 971444 37273486 ~ 37276857 (+) True LOC110536894
TU2377335 other downstream 977063 37279105 ~ 37280832 (+) True G2079197
TU2377712 other downstream 1064697 37366739 ~ 37368136 (+) True G2079468
TU2377942 other downstream 1513836 37815878 ~ 37819286 (+) False G2079657

Expression Profile