RNA id: TU2376308



Basic Information


Item Value
RNA id TU2376308
length 631
RNA type TUCP
GC content 0.59
exon number 2
gene id G2078382
representative True

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36033285 ~ 36033999 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtcccttaccctgtcccttaccctgtctctgtcccttaccctgtccctgtccattaccctgtcccttaccctgtccctgtccattaccctgtccctgtccctgtccctgtccctgtccctatccctgtcccttaccctgtcactgtccattaccctgtccctgtccctgtccctgtccattaccctgtccctgtccctgtccctgtccctgtccctgtccctgtcccttacactgtccctgtccctgtccattACCCcgtccctgtcccttaccctgtccctaaccctcatcactgtcccttaccctgtcactgtcccttaccctgtccatgtcccttaccctgtcccttaccctgtccctgtcccttaccctgtcccttaccctgtccctgtccctgtcccttaccctgtccctgtcccttaccctgtcccttaccctgtcccttaccctcgtcactgtcccttaccctgtcactgtcccttaccctgtccctgtcccttaccctgtcccttaccctgtccctgtccattaccctgtccctgtccattaccctgtccctttccctgtcccttaccctgcccctgtccctgtcccttaccctgtcccttaccctgcccctgtcccttaccc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2376265 lncRNA upstream 34894 35998053 ~ 35998391 (+) True G2078351
TU2376261 lncRNA upstream 40822 35992169 ~ 35992463 (+) True G2078347
TU2376260 lncRNA upstream 41708 35991363 ~ 35991577 (+) True G2078346
TU2376242 lncRNA upstream 69802 35963194 ~ 35963483 (+) True G2078331
TU2376206 lncRNA upstream 101259 35931812 ~ 35932026 (+) True G2078295
TU2376343 lncRNA downstream 40006 36074005 ~ 36074690 (+) True G2078416
TU2376346 lncRNA downstream 43474 36077473 ~ 36077693 (+) True G2078419
TU2376347 lncRNA downstream 44247 36078246 ~ 36078521 (+) True G2078420
TU2376350 lncRNA downstream 66365 36100364 ~ 36100648 (+) True G2078423
TU2376353 lncRNA downstream 72545 36106544 ~ 36106845 (+) True G2078426
XM_036965202.1 mRNA upstream 20951 36005425 ~ 36012334 (+) False LOC110507977
XM_036965203.1 mRNA upstream 20951 36006033 ~ 36012334 (+) False LOC110507977
XM_036965204.1 mRNA upstream 20951 36006595 ~ 36012334 (+) True LOC110507977
XM_021588404.2 mRNA upstream 210401 35804534 ~ 35822884 (+) True LOC110507976
XM_036965549.1 mRNA upstream 514176 35465699 ~ 35519109 (+) False LOC110507975
XM_036965269.1 mRNA downstream 331656 36365655 ~ 36381011 (+) False naalad2
XM_036965270.1 mRNA downstream 331656 36365655 ~ 36381011 (+) False naalad2
XM_036965271.1 mRNA downstream 331656 36365655 ~ 36381011 (+) True naalad2
XM_021588445.2 mRNA downstream 404226 36438225 ~ 36440709 (+) False LOC110508005
XM_036965056.1 mRNA downstream 419762 36453761 ~ 36546497 (+) False LOC110507218
TU2376207 other upstream 100776 35932115 ~ 35932509 (+) True G2078296
TU2376159 other upstream 161552 35870485 ~ 35871733 (+) True G2078253
TU2376088 other upstream 235295 35797572 ~ 35797990 (+) True G2078188
TU2375966 other upstream 340452 35684135 ~ 35692833 (+) True G2078087
TU2375601 other upstream 519772 35470330 ~ 35513513 (+) True G2077777
TU2376352 other downstream 68875 36102874 ~ 36104101 (+) True G2078425
TU2376423 other downstream 266939 36300938 ~ 36302042 (+) False G2078493
TU2376424 other downstream 266939 36300938 ~ 36302042 (+) False G2078493
TU2376426 other downstream 266939 36300938 ~ 36302042 (+) False G2078493
TU2376427 other downstream 266939 36300938 ~ 36302042 (+) True G2078493

Expression Profile