RNA id: TU2376384



Basic Information


Item Value
RNA id TU2376384
length 701
lncRNA type antisense_over
GC content 0.49
exon number 2
gene id G2078456
representative True

Chromosome Information


Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36165327 ~ 36168496 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


catcaacatcatcaccatcatcatctccaccatcatcatcatcagaatcatcaacatcatcatcatcaccatctccaccatcatcatcatcatcatcatcatcatcatctctaccatcatcatcatctccaccatcatcatcatcaacatcatcattatcatcaccatcatctcCACCATCATCATCGTCGTCATCTCAATAACAATATGAACAATCCCAACTATAATCAACGATAATAGTGACGGTAGATTGTTGTTAGTACAGCCAAGTCCAGTAGCACCAACCTGGTACCCTGGGCAGAGTGAGCGCTGCATGTTATGGAGCCCATAGGCCATGGAGTAGATGGCATTGATCACAAAGCCCATCTTAGTGTCCTGGGCATACTGCTGTCGCAATGACTCCCGCTCtgggagagaACTGCTGCAGGTGCGGTTGTACTTGAGGCTCTCCTGTGGGTGTCCCTTCAGCTTACAGTGGAAGCGATGTTGCCAGAACTCAGGAAACCAGGGGTTTCTCAGGTTGTTGTCCGGCCGCAGCTTCAGGTAGTACTCATCAAACCACTTCACATCAGCTGACTGCAGTTTGATGGTGATTCCCCCCGCCGCCTCGCGCACGTACCCATCTGTCACATCGTACCGGTCCGCCCAGCCATCACTGGGACAGTGGGACAGAAGGGACATAGAAGTTAGGAACCATGAAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU2376379 lncRNA upstream 5478 36159552 ~ 36159849 (+) True G2078451
TU2376375 lncRNA upstream 12199 36152817 ~ 36153128 (+) True G2078447
TU2376372 lncRNA upstream 13793 36142375 ~ 36151534 (+) True G2078444
TU2376351 lncRNA upstream 25505 36137663 ~ 36139822 (+) True G2078424
TU2376369 lncRNA upstream 27840 36137187 ~ 36137487 (+) True G2078442
TU2376391 lncRNA downstream 10635 36179131 ~ 36180018 (+) True G2078461
TU2376429 lncRNA downstream 95010 36263506 ~ 36302664 (+) False G2078493
TU2376472 lncRNA downstream 126830 36295326 ~ 36296020 (+) True G2078509
TU2376482 lncRNA downstream 136057 36304553 ~ 36305222 (+) True G2078515
TU2376502 lncRNA downstream 182827 36351323 ~ 36351646 (+) True G2078529
XM_036965202.1 mRNA upstream 152993 36005425 ~ 36012334 (+) False LOC110507977
XM_036965203.1 mRNA upstream 152993 36006033 ~ 36012334 (+) False LOC110507977
XM_036965204.1 mRNA upstream 152993 36006595 ~ 36012334 (+) True LOC110507977
XM_021588404.2 mRNA upstream 342443 35804534 ~ 35822884 (+) True LOC110507976
XM_036965549.1 mRNA upstream 646218 35465699 ~ 35519109 (+) False LOC110507975
XM_036965269.1 mRNA downstream 197159 36365655 ~ 36381011 (+) False naalad2
XM_036965270.1 mRNA downstream 197159 36365655 ~ 36381011 (+) False naalad2
XM_036965271.1 mRNA downstream 197159 36365655 ~ 36381011 (+) True naalad2
XM_021588445.2 mRNA downstream 269729 36438225 ~ 36440709 (+) False LOC110508005
XM_036965056.1 mRNA downstream 285265 36453761 ~ 36546497 (+) False LOC110507218
TU2376352 other upstream 61226 36102874 ~ 36104101 (+) True G2078425
TU2376308 other upstream 131328 36033285 ~ 36033999 (+) True G2078382
TU2376207 other upstream 232818 35932115 ~ 35932509 (+) True G2078296
TU2376159 other upstream 293594 35870485 ~ 35871733 (+) True G2078253
TU2376088 other upstream 367337 35797572 ~ 35797990 (+) True G2078188
TU2376423 other downstream 132442 36300938 ~ 36302042 (+) False G2078493
TU2376424 other downstream 132442 36300938 ~ 36302042 (+) False G2078493
TU2376426 other downstream 132442 36300938 ~ 36302042 (+) False G2078493
TU2376427 other downstream 132442 36300938 ~ 36302042 (+) True G2078493
TU2376553 other downstream 269879 36438375 ~ 36439354 (+) True LOC110508005

Expression Profile