Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00062342 |
| length | 6282 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 27 |
| gene id | XLOC_031829 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007117.7 |
| NCBI id | CM002890.2 |
| chromosome length | 60270059 |
| location | 7466223 ~ 7531427 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0033674 | positive regulation of kinase activity | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0008284 | positive regulation of cell population proliferation | biological_process |
| GO:0007399 | nervous system development | biological_process |
| GO:0007169 | transmembrane receptor protein tyrosine kinase signaling pathway | biological_process |
| GO:0009925 | basal plasma membrane | cellular_component |
| GO:0005887 | integral component of plasma membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0043235 | receptor complex | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0038131 | neuregulin receptor activity | molecular_function |
| GO:0038132 | neuregulin binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0004672 | protein kinase activity | molecular_function |
| GO:0004713 | protein tyrosine kinase activity | molecular_function |
| GO:0004714 | transmembrane receptor protein tyrosine kinase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030916-3 | Predicted to enable neuregulin binding activity; neuregulin receptor activity; and transmembrane receptor protein tyrosine kinase activity. Predicted to be involved in several processes, including positive regulation of cell population proliferation; positive regulation of kinase activity; and transmembrane receptor protein tyrosine kinase signaling pathway. Predicted to act upstream of or within protein phosphorylation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be active in basal plasma membrane. Predicted to be integral component of plasma membrane. Is expressed in epidermis; fin; glial cell; and heart. Human ortholog(s) of this gene implicated in lethal congenital contracture syndrome 2; lung adenocarcinoma; and lung non-small cell carcinoma. Orthologous to human ERBB3 (erb-b2 receptor tyrosine kinase 3). |
| ensembl_id | ENSDART00000148908 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00062339 | lncRNA | upstream | 30523 | 7429311 ~ 7435700 (+) | True | XLOC_031826 |
| TCONS_00064806 | lncRNA | upstream | 257594 | 7207593 ~ 7208629 (+) | True | XLOC_031820 |
| TCONS_00062325 | lncRNA | upstream | 565540 | 6894228 ~ 6900683 (+) | True | XLOC_031816 |
| TCONS_00062317 | lncRNA | upstream | 657883 | 6802528 ~ 6808340 (+) | False | XLOC_031814 |
| TCONS_00062315 | lncRNA | upstream | 665965 | 6799291 ~ 6800258 (+) | True | XLOC_031813 |
| TCONS_00062351 | lncRNA | downstream | 119300 | 7650727 ~ 7652412 (+) | True | XLOC_031831 |
| TCONS_00062354 | lncRNA | downstream | 558996 | 8090423 ~ 8093799 (+) | False | XLOC_031833 |
| TCONS_00064807 | lncRNA | downstream | 733337 | 8264764 ~ 8271403 (+) | True | XLOC_031837 |
| TCONS_00062364 | lncRNA | downstream | 807844 | 8339271 ~ 8346941 (+) | True | XLOC_031839 |
| TCONS_00064808 | lncRNA | downstream | 918884 | 8450311 ~ 8453642 (+) | True | XLOC_031840 |
| TCONS_00062340 | mRNA | upstream | 13664 | 7444899 ~ 7452559 (+) | True | XLOC_031827 |
| TCONS_00062338 | mRNA | upstream | 38711 | 7421898 ~ 7427512 (+) | True | XLOC_031825 |
| TCONS_00062337 | mRNA | upstream | 50880 | 7414215 ~ 7415343 (+) | True | XLOC_031824 |
| TCONS_00062336 | mRNA | upstream | 75765 | 7322587 ~ 7390458 (+) | True | XLOC_031823 |
| TCONS_00062333 | mRNA | upstream | 185924 | 7249563 ~ 7280299 (+) | False | XLOC_031822 |
| TCONS_00062347 | mRNA | downstream | 2174 | 7533601 ~ 7551140 (+) | True | XLOC_031830 |
| TCONS_00062349 | mRNA | downstream | 21658 | 7553085 ~ 7658285 (+) | False | XLOC_031831 |
| TCONS_00062348 | mRNA | downstream | 21658 | 7553085 ~ 7658285 (+) | False | XLOC_031831 |
| TCONS_00062350 | mRNA | downstream | 24187 | 7555614 ~ 7657019 (+) | False | XLOC_031831 |
| TCONS_00062352 | mRNA | downstream | 446184 | 7977611 ~ 8074849 (+) | True | XLOC_031832 |
| TCONS_00062341 | other | upstream | 12392 | 7453355 ~ 7453831 (+) | True | XLOC_031828 |
| TCONS_00062324 | other | upstream | 586174 | 6879927 ~ 6880049 (+) | True | XLOC_031817 |
| TCONS_00062321 | other | upstream | 633602 | 6832046 ~ 6832621 (+) | True | XLOC_031815 |
| TCONS_00062305 | other | upstream | 1192746 | 6271867 ~ 6273477 (+) | True | XLOC_031808 |
| TCONS_00062300 | other | upstream | 1250313 | 6215794 ~ 6215910 (+) | True | XLOC_031807 |
| TCONS_00062355 | other | downstream | 559150 | 8090577 ~ 8093799 (+) | True | XLOC_031833 |
| TCONS_00062362 | other | downstream | 783096 | 8314523 ~ 8321969 (+) | False | XLOC_031838 |
| TCONS_00062371 | other | downstream | 1159981 | 8691408 ~ 8691993 (+) | True | XLOC_031844 |
| TCONS_00062373 | other | downstream | 1240049 | 8771476 ~ 8771596 (+) | True | XLOC_031846 |
| TCONS_00062400 | other | downstream | 2346286 | 9877713 ~ 9878219 (+) | False | XLOC_031862 |
