Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00066024 |
| length | 1297 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 9 |
| gene id | XLOC_033753 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007118.7 |
| NCBI id | CM002891.2 |
| chromosome length | 74282399 |
| location | 26762717 ~ 26837282 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005887 | integral component of plasma membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-040718-232 | Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human TSPAN18 (tetraspanin 18). |
| ensembl_id | ENSDART00000167956 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00066022 | lncRNA | upstream | 6776 | 26750471 ~ 26756182 (+) | True | XLOC_033752 |
| TCONS_00066014 | lncRNA | upstream | 146788 | 26611727 ~ 26616170 (+) | True | XLOC_033748 |
| TCONS_00066013 | lncRNA | upstream | 204552 | 26557767 ~ 26558406 (+) | True | XLOC_033747 |
| TCONS_00068854 | lncRNA | upstream | 220535 | 26534071 ~ 26542423 (+) | False | XLOC_033746 |
| TCONS_00066027 | lncRNA | downstream | 22653 | 26859488 ~ 26876314 (+) | False | XLOC_033754 |
| TCONS_00066033 | lncRNA | downstream | 204538 | 27041373 ~ 27044000 (+) | True | XLOC_033756 |
| TCONS_00068855 | lncRNA | downstream | 207694 | 27044529 ~ 27048457 (+) | True | XLOC_033758 |
| TCONS_00066047 | lncRNA | downstream | 535598 | 27372433 ~ 27424587 (+) | False | XLOC_033760 |
| TCONS_00066048 | lncRNA | downstream | 607914 | 27444749 ~ 27449362 (+) | True | XLOC_033760 |
| TCONS_00066021 | mRNA | upstream | 23284 | 26716321 ~ 26739674 (+) | True | XLOC_033751 |
| TCONS_00066019 | mRNA | upstream | 24836 | 26709251 ~ 26738122 (+) | False | XLOC_033751 |
| TCONS_00066020 | mRNA | upstream | 24838 | 26709271 ~ 26738120 (+) | False | XLOC_033751 |
| TCONS_00066018 | mRNA | upstream | 58349 | 26649319 ~ 26704609 (+) | True | XLOC_033750 |
| TCONS_00066017 | mRNA | upstream | 59441 | 26649319 ~ 26703517 (+) | False | XLOC_033750 |
| TCONS_00066026 | mRNA | downstream | 7426 | 26844261 ~ 26892613 (+) | False | XLOC_033754 |
| TCONS_00066029 | mRNA | downstream | 161334 | 26998169 ~ 27021303 (+) | False | XLOC_033755 |
| TCONS_00066030 | mRNA | downstream | 161375 | 26998210 ~ 27018492 (+) | True | XLOC_033755 |
| TCONS_00066031 | mRNA | downstream | 204480 | 27041315 ~ 27044013 (+) | False | XLOC_033756 |
| TCONS_00066035 | mRNA | downstream | 222495 | 27059330 ~ 27231592 (+) | False | XLOC_033759 |
| TCONS_00065996 | other | upstream | 642222 | 26120631 ~ 26120736 (+) | True | XLOC_033735 |
| TCONS_00065993 | other | upstream | 691450 | 26071426 ~ 26071508 (+) | True | XLOC_033733 |
| TCONS_00065992 | other | upstream | 691951 | 26070874 ~ 26071007 (+) | True | XLOC_033732 |
| TCONS_00065985 | other | upstream | 734185 | 26028659 ~ 26028773 (+) | True | XLOC_033727 |
| TCONS_00065983 | other | upstream | 778119 | 25973649 ~ 25984839 (+) | True | XLOC_033725 |
| TCONS_00066028 | other | downstream | 51575 | 26888410 ~ 26892142 (+) | True | XLOC_033754 |
| TCONS_00066032 | other | downstream | 204529 | 27041364 ~ 27044003 (+) | False | XLOC_033756 |
| TCONS_00066034 | other | downstream | 206880 | 27043715 ~ 27043842 (+) | True | XLOC_033757 |
| TCONS_00066036 | other | downstream | 222559 | 27059394 ~ 27136646 (+) | False | XLOC_033759 |
| TCONS_00066050 | other | downstream | 618505 | 27455340 ~ 27660728 (+) | False | XLOC_033761 |
