RNA id: TU94514



Basic Information


Item Value
RNA id TU94514
length 835
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id G70613
representative True

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 4517132 ~ 4518554 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CCTCAAAACAGCCTGCAATCAGAGTCTCTGCACCATATTGACCGAAGGGTTTTCCCATCATTCCCATGTCCTGCTGGCCCTGATGGGGTCTAGGGAGGGGATGAGACCCAGGCAACTGAGAAATTCCTAGAGGACCTGATGTGGGATGTCTCACTGTGAAATTACTGTTGGacaTGCCTGTAGAGGACACACTGTAGAGACTGTTTCCTGTTACTCCCACATGATAAGAACTAGTATGTATTGGAACTTCAGGTCCCAAATACTGCTGAGCCAGCTGAGGGTTGAAGACAGAGCGTCCGGCCAGGAGGGACTGCATATCTCCTTGGTGGGGAAGGTCAATCAAGCCAGCACATTGGGGCTTAAAGCTGGGGATGGGCACATAGTGAAGTCCCTCTGATGAGTAGGATGGAGGCATGCAAAGGCCACTAGCATACACTGACGTTGATACTGAGCTAGCAGCTCCCCACTTCTGGGAGCTTTGAGAAGTTGCAGTGTTGCTAGTTTGCTGAATGTTCAGATTACTGCAATAGCCTGAGTCAACTTTGGTGAGCTGCCTTACATTGGACTCCGAGAGGTGCTTGTGTTTCCTGCACTCTGCTGAAAGATCACCAGTTCTGTCCCTGGGGTAGTGGTAGTTACATTCACTCTGGCTGCGAGTACAGCTCAGACCAGAAGCACTACGTGAGGGCTCTGGGCTTTTACACTGCTGTGCTGGTAGCCGGTCCAGACTTTTAGAATGCTCTGGTTTGACCTGGTCCAGGTTTTTGGGCAGGCCAAGAATATCAAGGTCAGCATCTGGTTCCACAGGTGGAGTTGGACTGATTCTGATGATGGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU94471 lncRNA downstream 83358 4432496 ~ 4433774 (-) False LOC120562328
TU94468 lncRNA downstream 108089 4408840 ~ 4409043 (-) True G70572
TU94430 lncRNA downstream 158314 4357980 ~ 4358818 (-) True G70538
TU94422 lncRNA downstream 219025 4297761 ~ 4298107 (-) True G70530
XR_005639873.1 lncRNA downstream 230489 4286172 ~ 4286643 (-) True LOC120562918
XR_005639724.1 lncRNA upstream 95270 4613824 ~ 4615309 (-) True LOC120562256
XR_005639728.1 lncRNA upstream 148685 4667239 ~ 4668215 (-) True LOC120562259
TU94564 lncRNA upstream 148727 4667281 ~ 4667661 (-) False LOC120562259
TU94580 lncRNA upstream 205563 4724117 ~ 4724379 (-) True G70669
TU94582 lncRNA upstream 216223 4734777 ~ 4734979 (-) True G70671
XM_039806963.1 mRNA downstream 54501 4445782 ~ 4462631 (-) False ptpn2a
XM_039806962.1 mRNA downstream 54502 4445782 ~ 4462630 (-) True ptpn2a
XM_039806019.1 mRNA downstream 72079 4361995 ~ 4445053 (-) False cep76
XM_039806018.1 mRNA downstream 72080 4410849 ~ 4445052 (-) True cep76
XM_039806017.1 mRNA downstream 82163 4426306 ~ 4434969 (-) True LOC120562328
XM_039805873.1 mRNA upstream 92831 4611385 ~ 4612551 (-) True LOC120562255
XM_039806810.1 mRNA upstream 383942 4902496 ~ 4911928 (-) True fam210aa
XM_039806021.1 mRNA upstream 588258 5106812 ~ 5156328 (-) True LOC120562332
XM_039805187.1 mRNA upstream 681947 5200501 ~ 5202258 (-) True LOC120561869
XM_039806020.1 mRNA upstream 744879 5263433 ~ 5264356 (-) True LOC120562331
XR_005639742.1 other downstream 72079 4411134 ~ 4445053 (-) False cep76
XR_005639741.1 other downstream 72079 4411134 ~ 4445053 (-) False cep76
TU94368 other downstream 439353 4072324 ~ 4077779 (-) False eny2
XR_005639743.1 other upstream 637378 5155932 ~ 5156330 (-) False LOC120562332
XR_005639715.1 other upstream 1297691 5816245 ~ 5817189 (-) False LOC120562243
TU95121 other upstream 2978509 7497063 ~ 7500153 (-) True G71108
XR_005639915.1 other upstream 3056811 7575365 ~ 7609859 (-) False enpp2
TU95317 other upstream 3277619 7796173 ~ 7807092 (-) True G71261

Expression Profile