RNA id: TU94580



Basic Information


Item Value
RNA id TU94580
length 263
lncRNA type inter_gene
GC content 0.31
exon number 1
gene id G70669
representative True

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 4724117 ~ 4724379 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ATCGATACGAATGCTTCTGTATTTATATGGCAGCAAATGTTGTTATGCAGTTTTGAAAAAGAATCAGAATAGAAAAGACCATTTTAAggtcaaaagtttaaaaaactattttctttgCACCTATTAATAACTCTGGAATTACAAACTGAAGTGTCTTAAGTTGTCCCAATCTGAAGgctttttcttctctgttatACAGAATAGTAAAGAATAGCTGTTATAGTAAACTCTGTCTAGGACATCGTCATTATTCAAAATCAACG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005639728.1 lncRNA downstream 55902 4667239 ~ 4668215 (-) True LOC120562259
TU94564 lncRNA downstream 56456 4667281 ~ 4667661 (-) False LOC120562259
XR_005639724.1 lncRNA downstream 108808 4613824 ~ 4615309 (-) True LOC120562256
TU94514 lncRNA downstream 205563 4517132 ~ 4518554 (-) True G70613
TU94471 lncRNA downstream 290343 4432496 ~ 4433774 (-) False LOC120562328
TU94582 lncRNA upstream 10398 4734777 ~ 4734979 (-) True G70671
TU94583 lncRNA upstream 10647 4735026 ~ 4735411 (-) True G70672
TU94586 lncRNA upstream 11039 4735418 ~ 4798432 (-) True G70675
XR_005639797.1 lncRNA upstream 50559 4774938 ~ 4826673 (-) True LOC120562618
TU94603 lncRNA upstream 152363 4876742 ~ 4877017 (-) True G70692
XM_039805873.1 mRNA downstream 111566 4611385 ~ 4612551 (-) True LOC120562255
XM_039806963.1 mRNA downstream 261486 4445782 ~ 4462631 (-) False ptpn2a
XM_039806962.1 mRNA downstream 261487 4445782 ~ 4462630 (-) True ptpn2a
XM_039806018.1 mRNA downstream 279065 4410849 ~ 4445052 (-) True cep76
XM_039806810.1 mRNA upstream 178117 4902496 ~ 4911928 (-) True fam210aa
XM_039806021.1 mRNA upstream 382433 5106812 ~ 5156328 (-) True LOC120562332
XM_039805187.1 mRNA upstream 476122 5200501 ~ 5202258 (-) True LOC120561869
XM_039806020.1 mRNA upstream 539054 5263433 ~ 5264356 (-) True LOC120562331
XM_039805867.1 mRNA upstream 1076005 5800384 ~ 5865827 (-) True LOC120562245
XR_005639742.1 other downstream 279064 4411134 ~ 4445053 (-) False cep76
XR_005639741.1 other downstream 279064 4411134 ~ 4445053 (-) False cep76
TU94370 other downstream 646338 4072324 ~ 4077779 (-) True eny2
XR_005639743.1 other upstream 431553 5155932 ~ 5156330 (-) False LOC120562332
XR_005639715.1 other upstream 1091866 5816245 ~ 5817189 (-) False LOC120562243
TU95121 other upstream 2772684 7497063 ~ 7500153 (-) True G71108
XR_005639915.1 other upstream 2850986 7575365 ~ 7609859 (-) False enpp2
TU95317 other upstream 3071794 7796173 ~ 7807092 (-) True G71261

Expression Profile