RNA id: TU94583



Basic Information


Item Value
RNA id TU94583
length 247
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id G70672
representative True

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 4735026 ~ 4735411 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ctcgtcgaggcgagtagagtcgagtcgAGTCGAaaaagcttgttactaacctagctctggggagttgcAATGTCCagctacgtcctgctgcgtcctgccgtGTCCACTgcgtccacccatgctctgctgtgccacgttacatcctgtaacgccctgctgtgcctggctatgacatgaactactacgactaccattgtagtcactgttccattatctttattgtgactattacgccactgttcatcat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU94582 lncRNA downstream 47 4734777 ~ 4734979 (-) True G70671
TU94580 lncRNA downstream 10647 4724117 ~ 4724379 (-) True G70669
XR_005639728.1 lncRNA downstream 66811 4667239 ~ 4668215 (-) True LOC120562259
TU94564 lncRNA downstream 67365 4667281 ~ 4667661 (-) False LOC120562259
XR_005639724.1 lncRNA downstream 119717 4613824 ~ 4615309 (-) True LOC120562256
TU94586 lncRNA upstream 7 4735418 ~ 4798432 (-) True G70675
XR_005639797.1 lncRNA upstream 39527 4774938 ~ 4826673 (-) True LOC120562618
TU94603 lncRNA upstream 141331 4876742 ~ 4877017 (-) True G70692
TU94605 lncRNA upstream 157446 4892857 ~ 4893545 (-) True G70694
TU94604 lncRNA upstream 159528 4894939 ~ 4897498 (-) True G70693
XM_039805873.1 mRNA downstream 122475 4611385 ~ 4612551 (-) True LOC120562255
XM_039806963.1 mRNA downstream 272395 4445782 ~ 4462631 (-) False ptpn2a
XM_039806962.1 mRNA downstream 272396 4445782 ~ 4462630 (-) True ptpn2a
XM_039806018.1 mRNA downstream 289974 4410849 ~ 4445052 (-) True cep76
XM_039806810.1 mRNA upstream 167085 4902496 ~ 4911928 (-) True fam210aa
XM_039806021.1 mRNA upstream 371401 5106812 ~ 5156328 (-) True LOC120562332
XM_039805187.1 mRNA upstream 465090 5200501 ~ 5202258 (-) True LOC120561869
XM_039806020.1 mRNA upstream 528022 5263433 ~ 5264356 (-) True LOC120562331
XM_039805867.1 mRNA upstream 1064973 5800384 ~ 5865827 (-) True LOC120562245
XR_005639742.1 other downstream 289973 4411134 ~ 4445053 (-) False cep76
XR_005639741.1 other downstream 289973 4411134 ~ 4445053 (-) False cep76
TU94370 other downstream 657247 4072324 ~ 4077779 (-) True eny2
XR_005639743.1 other upstream 420521 5155932 ~ 5156330 (-) False LOC120562332
XR_005639715.1 other upstream 1080834 5816245 ~ 5817189 (-) False LOC120562243
TU95121 other upstream 2761652 7497063 ~ 7500153 (-) True G71108
XR_005639915.1 other upstream 2839954 7575365 ~ 7609859 (-) False enpp2
TU95317 other upstream 3060762 7796173 ~ 7807092 (-) True G71261

Expression Profile