Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00000567 |
| length | 668 |
| RNA type | processed_transcript |
| GC content | 0.38 |
| exon number | 7 |
| gene id | XLOC_000332 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 27977297 ~ 28020042 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0031647 | regulation of protein stability | biological_process |
| GO:0050821 | protein stabilization | biological_process |
| GO:0005575 | cellular_component | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-041114-56 | Predicted to be involved in protein stabilization. Orthologous to human SUGT1 (SGT1 homolog, MIS12 kinetochore complex assembly cochaperone). |
| ensembl_id | ENSDART00000171868 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00003079 | lncRNA | upstream | 268142 | 27713379 ~ 27716251 (+) | False | XLOC_000329 |
| TCONS_00003078 | lncRNA | upstream | 1243244 | 26740115 ~ 26741149 (+) | True | XLOC_000327 |
| TCONS_00003077 | lncRNA | upstream | 1314290 | 26664689 ~ 26670103 (+) | False | XLOC_000325 |
| TCONS_00000545 | lncRNA | upstream | 1314508 | 26668026 ~ 26669885 (+) | True | XLOC_000325 |
| TCONS_00000540 | lncRNA | upstream | 1333166 | 26649027 ~ 26651227 (+) | True | XLOC_000324 |
| TCONS_00000568 | lncRNA | downstream | 36086 | 28031697 ~ 28036148 (+) | False | XLOC_000333 |
| TCONS_00000570 | lncRNA | downstream | 36097 | 28031708 ~ 28036148 (+) | False | XLOC_000333 |
| TCONS_00003080 | lncRNA | downstream | 476588 | 28472199 ~ 28473413 (+) | True | XLOC_000335 |
| TCONS_00000576 | lncRNA | downstream | 908159 | 28903770 ~ 28904635 (+) | True | XLOC_000336 |
| TCONS_00000577 | lncRNA | downstream | 1073038 | 29068649 ~ 29071356 (+) | False | XLOC_000337 |
| TCONS_00000561 | mRNA | upstream | 89576 | 27867706 ~ 27894817 (+) | False | XLOC_000331 |
| TCONS_00000562 | mRNA | upstream | 90372 | 27868294 ~ 27894021 (+) | True | XLOC_000331 |
| TCONS_00000560 | mRNA | upstream | 123245 | 27825980 ~ 27861148 (+) | True | XLOC_000330 |
| TCONS_00000559 | mRNA | upstream | 123249 | 27808916 ~ 27861144 (+) | False | XLOC_000330 |
| TCONS_00000558 | mRNA | upstream | 251214 | 27713380 ~ 27733179 (+) | True | XLOC_000329 |
| TCONS_00000569 | mRNA | downstream | 36086 | 28031697 ~ 28046806 (+) | False | XLOC_000333 |
| TCONS_00000571 | mRNA | downstream | 36097 | 28031708 ~ 28045997 (+) | False | XLOC_000333 |
| TCONS_00000572 | mRNA | downstream | 36142 | 28031753 ~ 28036214 (+) | False | XLOC_000333 |
| TCONS_00000573 | mRNA | downstream | 36143 | 28031754 ~ 28036471 (+) | False | XLOC_000333 |
| TCONS_00000574 | mRNA | downstream | 36281 | 28031892 ~ 28047242 (+) | True | XLOC_000333 |
| TCONS_00000557 | other | upstream | 253413 | 27713349 ~ 27730980 (+) | False | XLOC_000329 |
| TCONS_00000518 | other | upstream | 1864769 | 26111385 ~ 26119624 (+) | True | XLOC_000317 |
| TCONS_00000495 | other | upstream | 2864188 | 25120089 ~ 25120205 (+) | True | XLOC_000301 |
| TCONS_00000490 | other | upstream | 3599696 | 24382967 ~ 24384697 (+) | True | XLOC_000295 |
| TCONS_00000480 | other | upstream | 3869835 | 24114525 ~ 24114558 (+) | True | XLOC_000287 |
| TCONS_00000579 | other | downstream | 1073051 | 29068662 ~ 29080336 (+) | False | XLOC_000337 |
| TCONS_00000608 | other | downstream | 1836148 | 29831759 ~ 29860373 (+) | False | XLOC_000356 |
| TCONS_00000617 | other | downstream | 2170342 | 30165953 ~ 30166065 (+) | True | XLOC_000360 |
| TCONS_00000618 | other | downstream | 2231780 | 30227391 ~ 30227505 (+) | True | XLOC_000361 |
| TCONS_00000628 | other | downstream | 2960314 | 30955925 ~ 30965004 (+) | True | XLOC_000366 |
