Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026944730.2 |
| length | 897 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 5 |
| gene id | si:ch211-217g15.3 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 12875214 ~ 12877240 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0050878 | regulation of body fluid levels | biological_process |
| GO:0051180 | vitamin transport | biological_process |
| GO:0001775 | cell activation | biological_process |
| GO:0030168 | platelet activation | biological_process |
| GO:0009611 | response to wounding | biological_process |
| GO:0007596 | blood coagulation | biological_process |
| GO:0007599 | hemostasis | biological_process |
| GO:0050817 | coagulation | biological_process |
| GO:0042060 | wound healing | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU53642 | lncRNA | downstream | 6758 | 12866108 ~ 12868456 (-) | True | G45395 |
| TU53662 | lncRNA | downstream | 13162 | 12858974 ~ 12862052 (-) | True | G45415 |
| TU53663 | lncRNA | downstream | 13162 | 12859045 ~ 12862052 (-) | False | G45415 |
| TU53656 | lncRNA | downstream | 28501 | 12846507 ~ 12846713 (-) | True | G45409 |
| TU53638 | lncRNA | downstream | 65825 | 12809034 ~ 12809389 (-) | True | G45391 |
| TU53680 | lncRNA | upstream | 29034 | 12906274 ~ 12906475 (-) | True | G45422 |
| TU53880 | lncRNA | upstream | 371702 | 13248942 ~ 13250377 (-) | True | G45586 |
| TU53928 | lncRNA | upstream | 430854 | 13308094 ~ 13310240 (-) | True | G45616 |
| TU53934 | lncRNA | upstream | 435710 | 13312950 ~ 13313156 (-) | True | G45622 |
| TU54091 | lncRNA | upstream | 553125 | 13430365 ~ 13430899 (-) | False | csgalnact2 |
| XM_026945631.2 | mRNA | downstream | 64700 | 12791580 ~ 12810514 (-) | False | slc1a4 |
| XM_026945623.2 | mRNA | downstream | 71835 | 12791580 ~ 12803379 (-) | True | slc1a4 |
| XM_026944772.2 | mRNA | downstream | 84770 | 12785998 ~ 12790444 (-) | False | cep68 |
| XM_026944763.2 | mRNA | downstream | 84772 | 12783357 ~ 12790442 (-) | True | cep68 |
| XM_026936789.2 | mRNA | downstream | 106278 | 12762561 ~ 12768936 (-) | True | tbp |
| XM_026941562.2 | mRNA | upstream | 35570 | 12912810 ~ 12917062 (-) | True | znf511 |
| XM_034302751.1 | mRNA | upstream | 68469 | 12945709 ~ 12956916 (-) | True | erlin1 |
| XM_034302750.1 | mRNA | upstream | 68469 | 12945709 ~ 12956728 (-) | False | erlin1 |
| XM_026940390.2 | mRNA | upstream | 68469 | 12945709 ~ 12955248 (-) | False | erlin1 |
| XM_026937810.2 | mRNA | upstream | 128246 | 13005486 ~ 13031196 (-) | False | slka |
| trnal-cag | other | downstream | 140932 | 12734200 ~ 12734282 (-) | True | trnal-cag |
| trnae-cuc_9 | other | downstream | 206323 | 12668820 ~ 12668891 (-) | True | trnae-cuc_9 |
| trnak-cuu_2 | other | downstream | 206649 | 12668493 ~ 12668565 (-) | True | trnak-cuu_2 |
| trnak-cuu_1 | other | downstream | 235612 | 12639530 ~ 12639602 (-) | True | trnak-cuu_1 |
| trnae-cuc_8 | other | downstream | 235891 | 12639252 ~ 12639323 (-) | True | trnae-cuc_8 |
| XR_004577863.1 | other | upstream | 128246 | 13005486 ~ 13031196 (-) | False | slka |
| XR_004577668.1 | other | upstream | 1304651 | 14181891 ~ 14192243 (-) | True | ccdc85a |
| TU55100 | other | upstream | 1902625 | 14779865 ~ 14784734 (-) | False | sdhaf4 |
| TU55523 | other | upstream | 2536701 | 15413941 ~ 15416483 (-) | False | c3h10orf53 |
| XR_004577773.1 | other | upstream | 4101891 | 16979131 ~ 16982729 (-) | False | morn4 |
