RNA id: TCONS_00007746



Basic Information


Item Value
RNA id TCONS_00007746
length 1296
RNA type mRNA
GC content 0.43
exon number 11
gene id XLOC_004060
representative False

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 16084581 ~ 16093022 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GCGGGTTTACAGGCAAGGAGACTGAAATCACAGAGAGTTGATTCAGAAGCGAGCCTGTCGGATCTCAGATCTGAACTTGGATCAATCCTAGGGCTTGACAGGATTGCtgagaaatacatttttttgaaatgtgttggcAGAAGTTTTGCATTGGTCAAATTGAGGCAAGAGAGGGAACTGACAGTAAAATCATTTACTCCTCCTTTTGCTCCTTTTCCTGAGATCTACCTTTTGCCTGTGCTAGAGAACGACAGCGATCTTTGTTCTAGCACTTTCAGCCCTGAGACTTTAGTTAGCAGCACCGACCATCACAGTCATAATTTGCTCAGACCAACATGTGCACCTGCCAATATAAAAGAGCCCATTAAATTCCCTTCGATTAATATAGGCCCTCGGCAGTCTGTCCTGATGCAGGAGGCAGAGGAGGAGGAGAGTGATGAAGATGCAGAATACACTGACACTCCTCTTCCAACATACAGTGCACATGAGCAGATGGagtccataaacaaacagcatgACAGACAACTTGCCAAGCAGGAAGGCTTTTCTCAAGTAGAAATGAATGCAACTGCAAAAAAGAAACGCTATTTTAAAAGGAATGCAAAAAACACGGGAGCCTCACAGGCATTGGAGCCATTTGACGATACTCATGGCCTGACAAGGAAATTAAATAGTTCTCTGACACTGAAATCAAGCGAaggaaaaacagaaaatgtgGTTCTCATGAGTCGACCAAACTCTCCAATACCAGCAGAGAGCAATTCTCCACTGTCCGCCTATTCCTTGGAATTTTTTACACCACAAACAACTACAAGCAATGAGTATCAAAAGGAAATTAAGCTACTCAAAGAGCAAAAGAAAGAGCTTGAAAAAACAAgacaaatgcttttgaaaaagGGCAGAGTGCTTTTAGCTCTTAACAGACATCGTAGGAACCAAGCACGTGACAGGTGGAAGAGGCAATATTTTGACACTAAGAAATCCACAACTAGTCTAGAGGACAAGCTTAAAGGAATACAGCAGGAACTTCACACGTTCTACAGTAAAATGCTGCAACAACTCCAAGCCAGAGATGGTGCCAAACACCGAACCCAAACAAGGAAGCCGTCAAGCTCAAGGTTAAAGAATGAGTTAATAATCCAGATTATGACGGAAAGCAGTGAAATTGATAACCTGAGGAAAAATGTGGACGACGCTAAAATGAAACTGGCCACAGAGATCAAGTTGAGGAAGCAAGCAGCCACAGAACTACGAGCCTTGAGAGCAGAACTGATGGAAAAAAAGGCTCAGTTGTAA

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000139309

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00007739 lncRNA downstream 238068 15845588 ~ 15846513 (-) True XLOC_004057
TCONS_00007734 lncRNA downstream 275562 15806643 ~ 15809019 (-) True XLOC_004055
TCONS_00007733 lncRNA downstream 277073 15806392 ~ 15807508 (-) False XLOC_004055
TCONS_00007732 lncRNA downstream 280944 15802450 ~ 15803637 (-) True XLOC_004054
TCONS_00007731 lncRNA downstream 284658 15798258 ~ 15799923 (-) True XLOC_004053
TCONS_00007750 lncRNA upstream 10990 16104008 ~ 16115790 (-) True XLOC_004061
TCONS_00008461 lncRNA upstream 26994 16120012 ~ 16120290 (-) True XLOC_004062
TCONS_00007756 lncRNA upstream 86934 16179952 ~ 16181688 (-) True XLOC_004065
TCONS_00007762 lncRNA upstream 280654 16373672 ~ 16395302 (-) True XLOC_004066
TCONS_00007764 lncRNA upstream 576200 16669218 ~ 16675164 (-) True XLOC_004068
TCONS_00007742 mRNA downstream 63059 16019109 ~ 16021522 (-) False XLOC_004058
TCONS_00007743 mRNA downstream 63083 16020530 ~ 16021498 (-) False XLOC_004058
TCONS_00007740 mRNA downstream 63157 16014527 ~ 16021424 (-) False XLOC_004058
TCONS_00007737 mRNA downstream 209527 15833565 ~ 15875054 (-) False XLOC_004056
TCONS_00007736 mRNA downstream 209559 15833565 ~ 15875022 (-) False XLOC_004056
TCONS_00007748 mRNA upstream 1643 16094661 ~ 16115804 (-) False XLOC_004061
TCONS_00007749 mRNA upstream 1644 16094662 ~ 16115804 (-) False XLOC_004061
TCONS_00007752 mRNA upstream 46879 16139897 ~ 16152105 (-) False XLOC_004064
TCONS_00007753 mRNA upstream 50307 16143325 ~ 16152400 (-) True XLOC_004064
TCONS_00007754 mRNA upstream 83585 16176603 ~ 16215470 (-) False XLOC_004065
TCONS_00007745 other downstream 26274 16058191 ~ 16058307 (-) True XLOC_004059
TCONS_00007744 other downstream 63110 16020929 ~ 16021471 (-) True XLOC_004058
TCONS_00007741 other downstream 64966 16017883 ~ 16019615 (-) False XLOC_004058
TCONS_00007689 other downstream 2601794 13482671 ~ 13482787 (-) True XLOC_004029
TCONS_00007673 other downstream 3328306 12756143 ~ 12756275 (-) True XLOC_004024
TCONS_00007751 other upstream 34364 16127382 ~ 16127678 (-) True XLOC_004063
TCONS_00007758 other upstream 239806 16332824 ~ 16336886 (-) False XLOC_004066
TCONS_00007763 other upstream 551379 16644397 ~ 16644513 (-) True XLOC_004067
TCONS_00007777 other upstream 1813884 17906902 ~ 17908682 (-) True XLOC_004078
TCONS_00007803 other upstream 2498981 18591999 ~ 18604435 (-) True XLOC_004089

Expression Profile


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