RNA id: TCONS_00007689


Basic Information

Item Value
RNA id TCONS_00007689
length 117
RNA type rRNA
GC content 0.48
exon number 1
gene id XLOC_004029
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 13482671 ~ 13482787 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ACCAATACCATTATCACCCTgtagcccaagaccggttactcactgaagataAGCAGCACTGAGCCTGCTTAGTACCTGAATGGGAGCCCACATGAGAATAcaaggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000183833

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00007671 lncRNA downstream 741535 12734131 ~ 12741136 (-) False XLOC_004023
TCONS_00007672 lncRNA downstream 741535 12739176 ~ 12741136 (-) True XLOC_004023
TCONS_00008772 lncRNA downstream 991392 12429383 ~ 12491279 (-) True XLOC_003997
TCONS_00007692 lncRNA upstream 315666 13798453 ~ 13800802 (-) False XLOC_004032
TCONS_00008775 lncRNA upstream 315705 13798492 ~ 13800113 (-) False XLOC_004032
TCONS_00007693 lncRNA upstream 316889 13799676 ~ 13800802 (-) True XLOC_004032
TCONS_00008776 lncRNA upstream 664876 14147663 ~ 14148426 (-) True XLOC_004034
TCONS_00008777 lncRNA upstream 826110 14308897 ~ 14311083 (-) False XLOC_004035
TCONS_00007687 mRNA downstream 141188 13280248 ~ 13341483 (-) False XLOC_004028
TCONS_00007688 mRNA downstream 141620 13282592 ~ 13341051 (-) True XLOC_004028
TCONS_00007682 mRNA downstream 330147 13094818 ~ 13152524 (-) False XLOC_004027
TCONS_00007681 mRNA downstream 330147 13094818 ~ 13152524 (-) False XLOC_004027
TCONS_00007684 mRNA downstream 330360 13095050 ~ 13152311 (-) False XLOC_004027
TCONS_00007690 mRNA upstream 122836 13605623 ~ 13611132 (-) True XLOC_004030
TCONS_00007691 mRNA upstream 133228 13616015 ~ 13618412 (-) True XLOC_004031
TCONS_00007694 mRNA upstream 588902 14071689 ~ 14102158 (-) False XLOC_004033
TCONS_00007695 mRNA upstream 589995 14072782 ~ 14102131 (-) True XLOC_004033
TCONS_00007697 mRNA upstream 1184279 14667066 ~ 14669026 (-) True XLOC_004037
TCONS_00007673 other downstream 726396 12756143 ~ 12756275 (-) True XLOC_004024
TCONS_00007664 other downstream 790980 12691395 ~ 12691691 (-) True XLOC_004019
TCONS_00007658 other downstream 860904 12621518 ~ 12621767 (-) True XLOC_004015
TCONS_00007656 other downstream 891375 12590999 ~ 12591296 (-) True XLOC_004013
TCONS_00007648 other downstream 969409 12512966 ~ 12513262 (-) True XLOC_004008
TCONS_00007741 other upstream 2535096 16017883 ~ 16019615 (-) False XLOC_004058
TCONS_00007744 other upstream 2538142 16020929 ~ 16021471 (-) True XLOC_004058
TCONS_00007745 other upstream 2575404 16058191 ~ 16058307 (-) True XLOC_004059
TCONS_00007751 other upstream 2644595 16127382 ~ 16127678 (-) True XLOC_004063
TCONS_00007758 other upstream 2850037 16332824 ~ 16336886 (-) False XLOC_004066