RNA id: TCONS_00007744


Basic Information

Item Value
RNA id TCONS_00007744
length 350
RNA type processed_transcript
GC content 0.45
exon number 2
gene id XLOC_004058
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 16014527 ~ 16021522 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ttttgttgtgaacAGTGCATGGTTGGTTTGACCTGACCTGGCTTACTATGGGTGCAACAACAATGTGGATTTTAAGTTTTTGCATATAGCCCTGGTAGCAATGGTGGACTTCCTGGACCTAACAATCCCAGCAAGAGTACAATTTACAGTGCTGCAGTTAAAGGGGGTTATGACACCGAAAGCTACAGTTCCCAGGCTGGCTCTTCAGGCATTCTCATGGCGGTAGATAAAACTGGCTCTGATTCTTCCACTAGAAGCCAACTTCAGGGATCTGGTGTTTATTCAACGGGAAGTGGTAGTCTTGTTTATGGTACTGTGGGTAATGCAGTGAATGTTGGCATGTCTGGGAA

Function

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-6229 Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDART00000157561

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00007739 lncRNA downstream 174416 15845588 ~ 15846513 (-) True XLOC_004057
TCONS_00007734 lncRNA downstream 211910 15806643 ~ 15809019 (-) True XLOC_004055
TCONS_00007733 lncRNA downstream 213421 15806392 ~ 15807508 (-) False XLOC_004055
TCONS_00007732 lncRNA downstream 217292 15802450 ~ 15803637 (-) True XLOC_004054
TCONS_00007731 lncRNA downstream 221006 15798258 ~ 15799923 (-) True XLOC_004053
TCONS_00007750 lncRNA upstream 82537 16104008 ~ 16115790 (-) True XLOC_004061
TCONS_00008461 lncRNA upstream 98541 16120012 ~ 16120290 (-) True XLOC_004062
TCONS_00007756 lncRNA upstream 158481 16179952 ~ 16181688 (-) True XLOC_004065
TCONS_00007762 lncRNA upstream 352201 16373672 ~ 16395302 (-) True XLOC_004066
TCONS_00007764 lncRNA upstream 647747 16669218 ~ 16675164 (-) True XLOC_004068
TCONS_00007737 mRNA downstream 145875 15833565 ~ 15875054 (-) False XLOC_004056
TCONS_00007736 mRNA downstream 145907 15833565 ~ 15875022 (-) False XLOC_004056
TCONS_00007738 mRNA downstream 145955 15834397 ~ 15874974 (-) True XLOC_004056
TCONS_00007735 mRNA downstream 170135 15833565 ~ 15850794 (-) False XLOC_004056
TCONS_00007727 mRNA downstream 585434 15345654 ~ 15435495 (-) True XLOC_004049
TCONS_00007746 mRNA upstream 63110 16084581 ~ 16093018 (-) False XLOC_004060
TCONS_00007747 mRNA upstream 63110 16084581 ~ 16093022 (-) True XLOC_004060
TCONS_00007748 mRNA upstream 73190 16094661 ~ 16115804 (-) False XLOC_004061
TCONS_00007749 mRNA upstream 73191 16094662 ~ 16115804 (-) False XLOC_004061
TCONS_00007752 mRNA upstream 118426 16139897 ~ 16152105 (-) False XLOC_004064
TCONS_00007741 other downstream 1314 16017883 ~ 16019615 (-) False XLOC_004058
TCONS_00007689 other downstream 2538142 13482671 ~ 13482787 (-) True XLOC_004029
TCONS_00007673 other downstream 3264654 12756143 ~ 12756275 (-) True XLOC_004024
TCONS_00007664 other downstream 3329238 12691395 ~ 12691691 (-) True XLOC_004019
TCONS_00007658 other downstream 3399162 12621518 ~ 12621767 (-) True XLOC_004015
TCONS_00007745 other upstream 36720 16058191 ~ 16058307 (-) True XLOC_004059
TCONS_00007751 other upstream 105911 16127382 ~ 16127678 (-) True XLOC_004063
TCONS_00007758 other upstream 311353 16332824 ~ 16336886 (-) False XLOC_004066
TCONS_00007763 other upstream 622926 16644397 ~ 16644513 (-) True XLOC_004067
TCONS_00007777 other upstream 1885431 17906902 ~ 17908682 (-) True XLOC_004078

Expression Profile

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