RNA id: TCONS_00007692


Basic Information

Item Value
RNA id TCONS_00007692
length 148
lncRNA type lincRNA
GC content 0.49
exon number 2
gene id XLOC_004032
representative False

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 13798453 ~ 13800802 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCACGAGGTGTCCTCTCACCAGCAGCAGCTGCCATCTCCTGATTCAGGACACAGAGCCAGAAGATATTTGCACAATAGAGATGGAGATGGACATCCTTAGCACTGTTGCAGATGATGTTGCCACTCTTCAGACCAACCtaaatgtaag

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000161378

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00007671 lncRNA downstream 1057317 12734131 ~ 12741136 (-) False XLOC_004023
TCONS_00007672 lncRNA downstream 1057317 12739176 ~ 12741136 (-) True XLOC_004023
TCONS_00008772 lncRNA downstream 1307174 12429383 ~ 12491279 (-) True XLOC_003997
TCONS_00008773 lncRNA downstream 1333044 12430155 ~ 12465409 (-) True XLOC_003998
TCONS_00008774 lncRNA downstream 1333967 12463700 ~ 12464486 (-) True XLOC_004002
TCONS_00008776 lncRNA upstream 346861 14147663 ~ 14148426 (-) True XLOC_004034
TCONS_00008777 lncRNA upstream 508095 14308897 ~ 14311083 (-) False XLOC_004035
TCONS_00007696 lncRNA upstream 508095 14308897 ~ 14311237 (-) True XLOC_004035
TCONS_00008778 lncRNA upstream 630120 14430922 ~ 14432200 (-) True XLOC_004036
TCONS_00007698 lncRNA upstream 892679 14693481 ~ 14695864 (-) True XLOC_004038
TCONS_00007691 mRNA downstream 180041 13616015 ~ 13618412 (-) True XLOC_004031
TCONS_00007690 mRNA downstream 187321 13605623 ~ 13611132 (-) True XLOC_004030
TCONS_00007687 mRNA downstream 456970 13280248 ~ 13341483 (-) False XLOC_004028
TCONS_00007688 mRNA downstream 457402 13282592 ~ 13341051 (-) True XLOC_004028
TCONS_00007682 mRNA downstream 645929 13094818 ~ 13152524 (-) False XLOC_004027
TCONS_00007694 mRNA upstream 270887 14071689 ~ 14102158 (-) False XLOC_004033
TCONS_00007695 mRNA upstream 271980 14072782 ~ 14102131 (-) True XLOC_004033
TCONS_00007697 mRNA upstream 866264 14667066 ~ 14669026 (-) True XLOC_004037
TCONS_00007699 mRNA upstream 971106 14771908 ~ 14813029 (-) False XLOC_004040
TCONS_00007700 mRNA upstream 971796 14772598 ~ 14789918 (-) False XLOC_004040
TCONS_00007689 other downstream 315666 13482671 ~ 13482787 (-) True XLOC_004029
TCONS_00007673 other downstream 1042178 12756143 ~ 12756275 (-) True XLOC_004024
TCONS_00007664 other downstream 1106762 12691395 ~ 12691691 (-) True XLOC_004019
TCONS_00007658 other downstream 1176686 12621518 ~ 12621767 (-) True XLOC_004015
TCONS_00007656 other downstream 1207157 12590999 ~ 12591296 (-) True XLOC_004013
TCONS_00007741 other upstream 2217081 16017883 ~ 16019615 (-) False XLOC_004058
TCONS_00007744 other upstream 2220127 16020929 ~ 16021471 (-) True XLOC_004058
TCONS_00007745 other upstream 2257389 16058191 ~ 16058307 (-) True XLOC_004059
TCONS_00007751 other upstream 2326580 16127382 ~ 16127678 (-) True XLOC_004063
TCONS_00007758 other upstream 2532022 16332824 ~ 16336886 (-) False XLOC_004066