Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU456342 |
| length | 269 |
| lncRNA type | intronic |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G384922 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 10773448 ~ 10773716 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU456337 | lncRNA | downstream | 35149 | 10737895 ~ 10738299 (-) | True | G384917 |
| TU456260 | lncRNA | downstream | 89844 | 10683395 ~ 10683604 (-) | True | G384850 |
| TU456259 | lncRNA | downstream | 91025 | 10682220 ~ 10682423 (-) | True | G384849 |
| TU456216 | lncRNA | downstream | 175065 | 10598127 ~ 10598383 (-) | True | G384806 |
| TU456214 | lncRNA | downstream | 178383 | 10594841 ~ 10595065 (-) | True | G384804 |
| TU456345 | lncRNA | upstream | 11276 | 10784992 ~ 10785310 (-) | True | G384925 |
| TU456349 | lncRNA | upstream | 11879 | 10785595 ~ 10819760 (-) | True | G384927 |
| TU456350 | lncRNA | upstream | 11879 | 10785595 ~ 10798518 (-) | False | G384927 |
| TU456353 | lncRNA | upstream | 47921 | 10821637 ~ 10825954 (-) | True | G384928 |
| XR_003403264.2 | lncRNA | upstream | 140423 | 10914139 ~ 10917263 (-) | True | LOC113531553 |
| XM_034300713.1 | mRNA | downstream | 8337 | 10691244 ~ 10765111 (-) | False | coro1cb |
| XM_026922022.2 | mRNA | downstream | 8337 | 10691244 ~ 10765111 (-) | True | coro1cb |
| XM_026922024.2 | mRNA | downstream | 8337 | 10699198 ~ 10765111 (-) | False | coro1cb |
| XM_026922023.2 | mRNA | downstream | 8337 | 10699198 ~ 10765111 (-) | False | coro1cb |
| XM_026922025.2 | mRNA | downstream | 8337 | 10699198 ~ 10765111 (-) | False | coro1cb |
| XM_026922349.2 | mRNA | upstream | 60741 | 10834457 ~ 10981914 (-) | True | mcc |
| XM_026922350.2 | mRNA | upstream | 60741 | 10834457 ~ 10977123 (-) | False | mcc |
| XM_026922348.2 | mRNA | upstream | 60741 | 10834457 ~ 10975345 (-) | False | mcc |
| XM_034300955.1 | mRNA | upstream | 373415 | 11147131 ~ 11151024 (-) | True | LOC113523726 |
| XM_034300936.1 | mRNA | upstream | 581958 | 11355674 ~ 11452919 (-) | False | mvb12ba |
| TU456221 | other | downstream | 167176 | 10605990 ~ 10606272 (-) | True | G384811 |
| XR_003403283.1 | other | downstream | 1088675 | 9684647 ~ 9684773 (-) | True | LOC113531681 |
| XR_003403281.1 | other | downstream | 1089050 | 9684272 ~ 9684398 (-) | True | LOC113531679 |
| XR_003403284.2 | other | downstream | 1090343 | 9682981 ~ 9683105 (-) | True | LOC113531682 |
| XR_003403282.1 | other | downstream | 1090715 | 9682607 ~ 9682733 (-) | True | LOC113531680 |
| TU456386 | other | upstream | 304996 | 11078712 ~ 11083941 (-) | True | G384960 |
| XR_004577405.1 | other | upstream | 847946 | 11621662 ~ 11627582 (-) | False | map1b |
| XR_004577404.1 | other | upstream | 847946 | 11621662 ~ 11627522 (-) | False | map1b |
| XR_003403212.2 | other | upstream | 917518 | 11691234 ~ 11698544 (-) | False | LOC113531030 |
| XR_003403280.1 | other | upstream | 3039517 | 13813233 ~ 13813329 (-) | True | LOC113531678 |
