Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003403280.1 |
| length | 97 |
| RNA type | ncRNA |
| GC content | 0.43 |
| exon number | 1 |
| gene id | LOC113531678 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 13813233 ~ 13813329 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU458487 | lncRNA | downstream | 132724 | 13616122 ~ 13680509 (-) | False | selenow1 |
| TU458486 | lncRNA | downstream | 132724 | 13675983 ~ 13680509 (-) | True | selenow1 |
| TU458494 | lncRNA | downstream | 141093 | 13671223 ~ 13672140 (-) | True | G386814 |
| TU458441 | lncRNA | downstream | 289911 | 13523086 ~ 13523322 (-) | True | G386763 |
| TU458402 | lncRNA | downstream | 464030 | 13327325 ~ 13349203 (-) | True | G386730 |
| TU458541 | lncRNA | upstream | 40508 | 13853837 ~ 13854055 (-) | True | G386849 |
| XR_004577399.1 | lncRNA | upstream | 62688 | 13876017 ~ 13876806 (-) | True | LOC117596230 |
| TU458563 | lncRNA | upstream | 97933 | 13911262 ~ 13916801 (-) | True | G386868 |
| TU458564 | lncRNA | upstream | 97933 | 13911262 ~ 13916801 (-) | False | G386868 |
| TU458569 | lncRNA | upstream | 117158 | 13930487 ~ 13930698 (-) | True | G386873 |
| XM_034300880.1 | mRNA | downstream | 552 | 13778536 ~ 13812681 (-) | False | ap2b1 |
| XM_034300881.1 | mRNA | downstream | 559 | 13778536 ~ 13812674 (-) | False | ap2b1 |
| XM_026922437.2 | mRNA | downstream | 6403 | 13778536 ~ 13806830 (-) | False | ap2b1 |
| XM_026922438.2 | mRNA | downstream | 6408 | 13778536 ~ 13806825 (-) | False | ap2b1 |
| XM_026922441.2 | mRNA | downstream | 6408 | 13778536 ~ 13806825 (-) | False | ap2b1 |
| XM_026922445.2 | mRNA | upstream | 1514 | 13814843 ~ 13820830 (-) | False | orai2 |
| XM_026922446.2 | mRNA | upstream | 1514 | 13814843 ~ 13820548 (-) | True | orai2 |
| XM_026922494.2 | mRNA | upstream | 10057 | 13823386 ~ 13841334 (-) | True | bckdk |
| XM_026922270.2 | mRNA | upstream | 29849 | 13843178 ~ 13852283 (-) | True | lrwd1 |
| XM_034300486.1 | mRNA | upstream | 29849 | 13843178 ~ 13852184 (-) | False | lrwd1 |
| XR_003403212.2 | other | downstream | 2114689 | 11691234 ~ 11698544 (-) | False | LOC113531030 |
| XR_004577405.1 | other | downstream | 2185651 | 11621662 ~ 11627582 (-) | False | map1b |
| XR_004577404.1 | other | downstream | 2185711 | 11621662 ~ 11627522 (-) | False | map1b |
| TU456386 | other | downstream | 2729292 | 11078712 ~ 11083941 (-) | True | G384960 |
| TU456221 | other | downstream | 3206961 | 10605990 ~ 10606272 (-) | True | G384811 |
| XR_003403286.1 | other | upstream | 102035 | 13915364 ~ 13915497 (-) | True | LOC113531684 |
| TU459046 | other | upstream | 1103333 | 14916662 ~ 14923384 (-) | True | ccdc84 |
| XR_003403223.2 | other | upstream | 2564256 | 16377585 ~ 16380787 (-) | False | LOC113531235 |
| trnam-cau_50 | other | upstream | 2618063 | 16431392 ~ 16431464 (-) | True | trnam-cau_50 |
| trnam-cau_51 | other | upstream | 2621869 | 16435198 ~ 16435270 (-) | True | trnam-cau_51 |
