Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU458486 |
| length | 734 |
| lncRNA type | sense_over |
| GC content | 0.46 |
| exon number | 6 |
| gene id | selenow1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047621.1 |
| NCBI id | CM018567.1 |
| chromosome length | 18889892 |
| location | 13616122 ~ 13680525 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU458494 | lncRNA | downstream | 3843 | 13671223 ~ 13672140 (-) | True | G386814 |
| TU458441 | lncRNA | downstream | 152661 | 13523086 ~ 13523322 (-) | True | G386763 |
| TU458402 | lncRNA | downstream | 326780 | 13327325 ~ 13349203 (-) | True | G386730 |
| TU458377 | lncRNA | downstream | 352991 | 13293523 ~ 13322992 (-) | True | G386705 |
| TU458294 | lncRNA | downstream | 467909 | 13207399 ~ 13208074 (-) | True | G386644 |
| TU458536 | lncRNA | upstream | 129092 | 13809601 ~ 13827854 (-) | True | G386845 |
| TU458541 | lncRNA | upstream | 173328 | 13853837 ~ 13854055 (-) | True | G386849 |
| XR_004577399.1 | lncRNA | upstream | 195508 | 13876017 ~ 13876806 (-) | True | LOC117596230 |
| TU458563 | lncRNA | upstream | 230753 | 13911262 ~ 13916801 (-) | True | G386868 |
| TU458564 | lncRNA | upstream | 230753 | 13911262 ~ 13916801 (-) | False | G386868 |
| XM_034300863.1 | mRNA | downstream | 2365 | 13658883 ~ 13673618 (-) | False | akap10 |
| XM_034300860.1 | mRNA | downstream | 2369 | 13655790 ~ 13673614 (-) | False | akap10 |
| XM_034300862.1 | mRNA | downstream | 2369 | 13655790 ~ 13673614 (-) | False | akap10 |
| XM_034300861.1 | mRNA | downstream | 2369 | 13655790 ~ 13673614 (-) | False | akap10 |
| XM_034300858.1 | mRNA | downstream | 2370 | 13655790 ~ 13673613 (-) | True | akap10 |
| XM_026922154.2 | mRNA | upstream | 2841 | 13683350 ~ 13695503 (-) | False | ehd2a |
| XM_026922153.2 | mRNA | upstream | 2841 | 13683350 ~ 13695502 (-) | True | ehd2a |
| XM_026922155.2 | mRNA | upstream | 2841 | 13683350 ~ 13695485 (-) | False | ehd2a |
| XM_034300596.1 | mRNA | upstream | 2841 | 13683350 ~ 13695445 (-) | False | ehd2a |
| XM_026922152.2 | mRNA | upstream | 22992 | 13703501 ~ 13707400 (-) | True | si:dkeyp-117b8.4 |
| XR_003403212.2 | other | downstream | 1977439 | 11691234 ~ 11698544 (-) | False | LOC113531030 |
| XR_004577405.1 | other | downstream | 2048401 | 11621662 ~ 11627582 (-) | False | map1b |
| XR_004577404.1 | other | downstream | 2048461 | 11621662 ~ 11627522 (-) | False | map1b |
| TU456386 | other | downstream | 2592042 | 11078712 ~ 11083941 (-) | True | G384960 |
| TU456221 | other | downstream | 3069711 | 10605990 ~ 10606272 (-) | True | G384811 |
| XR_003403280.1 | other | upstream | 132724 | 13813233 ~ 13813329 (-) | True | LOC113531678 |
| XR_003403286.1 | other | upstream | 234855 | 13915364 ~ 13915497 (-) | True | LOC113531684 |
| TU459046 | other | upstream | 1236153 | 14916662 ~ 14923384 (-) | True | ccdc84 |
| XR_003403223.2 | other | upstream | 2697076 | 16377585 ~ 16380787 (-) | False | LOC113531235 |
| trnam-cau_50 | other | upstream | 2750883 | 16431392 ~ 16431464 (-) | True | trnam-cau_50 |
