RNA id: TU26285



Basic Information


Item Value
RNA id TU26285
length 368
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G21034
representative True

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 2922660 ~ 2923027 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTTCCATCAAATGTCACCCCGACTCTTTCAATTCATCACTTTGCAAAAAGCATCACCTTATTTTCCCTTGCTTTTCTTCTCGACGTCGGCTACTTATCATTCATGTTCCACATCATTGTTCTTTATTTCAGCTGCGTTCCAGAAGGGATGGCCTGTGTTCTAATGGAGAGGAGCAGCAGGTTTCGCAGGGCTGGAGGTTTCTGCTTCATCGTTGCTAGAGTGGTAGGCACTCCACTGCATTCATTGTGAATGAGCATTTAATCCATTGGGTTGATATGATCAGCATAGCTTATTATATGGGTCAATTTCCTGCCATTATTAAGCAGCCGCAACTCATACGATACCCCGGCGATTCCTTTTTGTAAATC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU26258 lncRNA downstream 19040 2902562 ~ 2903620 (-) True G21020
TU26204 lncRNA downstream 259011 2644905 ~ 2663649 (-) True AMCG00007072
TU26198 lncRNA downstream 284864 2629097 ~ 2637796 (-) True G20976
TU26186 lncRNA downstream 374371 2548004 ~ 2548289 (-) True G20965
TU26162 lncRNA downstream 495239 2427159 ~ 2427421 (-) True G20947
TU26287 lncRNA upstream 83371 3006398 ~ 3010255 (-) True G21036
TU26340 lncRNA upstream 485127 3408154 ~ 3408708 (-) True G21082
TU26358 lncRNA upstream 553050 3476077 ~ 3476799 (-) False AMCG00007091
TU26383 lncRNA upstream 578856 3501883 ~ 3502845 (-) True G21122
TU26560 lncRNA upstream 1356289 4279316 ~ 4279569 (-) True G21249
AMCG00007080 mRNA downstream 5471 2912429 ~ 2917189 (-) True AMCG00007080
AMCG00007081 mRNA downstream 14452 2904793 ~ 2908208 (-) True AMCG00007081
AMCG00007078 mRNA downstream 34245 2882368 ~ 2888415 (-) True AMCG00007078
AMCG00007072 mRNA downstream 259289 2644955 ~ 2663371 (-) False AMCG00007072
AMCG00007071 mRNA downstream 293655 2597078 ~ 2629005 (-) True AMCG00007071
AMCG00007085 mRNA upstream 205752 3128779 ~ 3131839 (-) True AMCG00007085
AMCG00007091 mRNA upstream 553041 3476068 ~ 3500670 (-) True AMCG00007091
AMCG00007094 mRNA upstream 580822 3503849 ~ 3538983 (-) True AMCG00007094
AMCG00007093 mRNA upstream 732343 3655370 ~ 3680401 (-) True AMCG00007093
AMCG00007097 mRNA upstream 782377 3705404 ~ 3717619 (-) True AMCG00007097
TU26061 other downstream 752090 2167310 ~ 2170570 (-) False AMCG00007059
TU26054 other downstream 776845 2144716 ~ 2145815 (-) False AMCG00007059
TU25725 other downstream 1969598 952236 ~ 953062 (-) True G20630
TU25699 other downstream 2074371 845929 ~ 848289 (-) False G20609
TU26783 other upstream 2118632 5041659 ~ 5048839 (-) True G21426
TU26778 other upstream 2119493 5042520 ~ 5049520 (-) False G21426
TU26789 other upstream 2133760 5056787 ~ 5057406 (-) True G21429
TU27087 other upstream 2893782 5816809 ~ 5820284 (-) True G21632
TU27173 other upstream 3084613 6007640 ~ 6014169 (-) False AMCG00007173

Expression Profile