RNA id: TU26162


Basic Information

Item Value
RNA id TU26162
length 236
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G20947
representative True

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 2427159 ~ 2427421 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gtgtgtctgtgtgtgtgtcagtgtgtgtgtctctgtgtgtgtgtgtgtgtgtcagtgtgtgtgtgtgtgtgtgagtgtcagtgtgtgtgtgtgtgtcagtgtgtgtgtgtctgtgtgtgtgtgtagtgtcagtgtgtgtgtgtgtgtcagtgtgtgtgtgtgtctgtgtgtgtgtctctgtgtgtgtgtgtgagtgtcagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU26117 lncRNA downstream 119041 2200200 ~ 2308118 (-) False G20908
TU26123 lncRNA downstream 138541 2286824 ~ 2288618 (-) True G20914
TU26116 lncRNA downstream 172599 2200053 ~ 2254560 (-) True G20908
TU26063 lncRNA downstream 254676 2171904 ~ 2172483 (-) True G20870
TU25945 lncRNA downstream 696680 1676304 ~ 1730479 (-) True G20795
TU26186 lncRNA upstream 120583 2548004 ~ 2548289 (-) True G20965
TU26198 lncRNA upstream 201676 2629097 ~ 2637796 (-) True G20976
TU26204 lncRNA upstream 217484 2644905 ~ 2663649 (-) True AMCG00007072
TU26258 lncRNA upstream 475141 2902562 ~ 2903620 (-) True G21020
TU26285 lncRNA upstream 495239 2922660 ~ 2923027 (-) True G21034
AMCG00007067 mRNA downstream 45136 2376136 ~ 2382023 (-) True AMCG00007067
AMCG00007066 mRNA downstream 63359 2350038 ~ 2363800 (-) True AMCG00007066
AMCG00007065 mRNA downstream 80458 2326612 ~ 2346701 (-) True AMCG00007065
AMCG00007063 mRNA downstream 116960 2302383 ~ 2310199 (-) True AMCG00007063
AMCG00007062 mRNA downstream 129278 2290403 ~ 2297881 (-) True AMCG00007062
AMCG00007070 mRNA upstream 34733 2462154 ~ 2475341 (-) True AMCG00007070
AMCG00007071 mRNA upstream 169657 2597078 ~ 2629005 (-) True AMCG00007071
AMCG00007072 mRNA upstream 217534 2644955 ~ 2663371 (-) False AMCG00007072
AMCG00007078 mRNA upstream 454947 2882368 ~ 2888415 (-) True AMCG00007078
AMCG00007081 mRNA upstream 477372 2904793 ~ 2908208 (-) True AMCG00007081
TU26061 other downstream 256589 2167310 ~ 2170570 (-) False AMCG00007059
TU26054 other downstream 281344 2144716 ~ 2145815 (-) False AMCG00007059
TU25725 other downstream 1474097 952236 ~ 953062 (-) True G20630
TU25699 other downstream 1578870 845929 ~ 848289 (-) False G20609
TU26783 other upstream 2614238 5041659 ~ 5048839 (-) True G21426
TU26778 other upstream 2615099 5042520 ~ 5049520 (-) False G21426
TU26789 other upstream 2629366 5056787 ~ 5057406 (-) True G21429
TU27087 other upstream 3389388 5816809 ~ 5820284 (-) True G21632
TU27173 other upstream 3580219 6007640 ~ 6014169 (-) False AMCG00007173

Expression Profile