Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00009406 |
| length | 1101 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 6 |
| gene id | XLOC_004755 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007123.7 |
| NCBI id | CM002896.2 |
| chromosome length | 49182954 |
| location | 27021979 ~ 27028808 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0043984 | histone H4-K16 acetylation | biological_process |
| GO:0072487 | MSL complex | cellular_component |
| GO:0003682 | chromatin binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030131-4491 | Predicted to enable chromatin binding activity. Predicted to be involved in histone H4-K16 acetylation. Predicted to be part of MSL complex. Orthologous to human MSL1 (MSL complex subunit 1). |
| ensembl_id | ENSDART00000153104 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00009402 | lncRNA | upstream | 128060 | 26894321 ~ 26896616 (+) | True | XLOC_004754 |
| TCONS_00010944 | lncRNA | upstream | 190484 | 26737431 ~ 26834192 (+) | True | XLOC_004752 |
| TCONS_00010943 | lncRNA | upstream | 298895 | 26638127 ~ 26725781 (+) | False | XLOC_004750 |
| TCONS_00010743 | lncRNA | upstream | 332625 | 26691819 ~ 26692051 (+) | True | XLOC_004751 |
| TCONS_00010941 | lncRNA | upstream | 431378 | 26589644 ~ 26593298 (+) | True | XLOC_004748 |
| TCONS_00009425 | lncRNA | downstream | 187387 | 27213760 ~ 27229858 (+) | False | XLOC_004765 |
| TCONS_00009431 | lncRNA | downstream | 205371 | 27231744 ~ 27232651 (+) | False | XLOC_004766 |
| TCONS_00010945 | lncRNA | downstream | 1350657 | 28377030 ~ 28381255 (+) | True | XLOC_004777 |
| TCONS_00010744 | lncRNA | downstream | 1591328 | 28617701 ~ 28617965 (+) | True | XLOC_004779 |
| TCONS_00009458 | lncRNA | downstream | 1907151 | 28933524 ~ 28946150 (+) | False | XLOC_004786 |
| TCONS_00009401 | mRNA | upstream | 59678 | 26877381 ~ 26964998 (+) | True | XLOC_004753 |
| TCONS_00009398 | mRNA | upstream | 298628 | 26632448 ~ 26726048 (+) | False | XLOC_004750 |
| TCONS_00009397 | mRNA | upstream | 298895 | 26622010 ~ 26725781 (+) | False | XLOC_004750 |
| TCONS_00009407 | mRNA | downstream | 8221 | 27034594 ~ 27060129 (+) | False | XLOC_004756 |
| TCONS_00009408 | mRNA | downstream | 8387 | 27034760 ~ 27060806 (+) | False | XLOC_004756 |
| TCONS_00009409 | mRNA | downstream | 8387 | 27034760 ~ 27061336 (+) | False | XLOC_004756 |
| TCONS_00009410 | mRNA | downstream | 29527 | 27055900 ~ 27058992 (+) | True | XLOC_004756 |
| TCONS_00009411 | mRNA | downstream | 35347 | 27061720 ~ 27092286 (+) | False | XLOC_004757 |
| TCONS_00009383 | other | upstream | 1376433 | 25648127 ~ 25648243 (+) | True | XLOC_004738 |
| TCONS_00009380 | other | upstream | 1546770 | 25468312 ~ 25477906 (+) | True | XLOC_004734 |
| TCONS_00009372 | other | upstream | 1772889 | 25223799 ~ 25251787 (+) | False | XLOC_004732 |
| TCONS_00009364 | other | upstream | 2459084 | 24565478 ~ 24565592 (+) | True | XLOC_004724 |
| TCONS_00009361 | other | upstream | 2606336 | 24418224 ~ 24418340 (+) | True | XLOC_004723 |
| TCONS_00009419 | other | downstream | 108496 | 27134869 ~ 27134967 (+) | True | XLOC_004762 |
| TCONS_00009421 | other | downstream | 130570 | 27156943 ~ 27163064 (+) | False | XLOC_004764 |
| TCONS_00009426 | other | downstream | 192620 | 27218993 ~ 27220589 (+) | True | XLOC_004765 |
| TCONS_00009428 | other | downstream | 204922 | 27231295 ~ 27234421 (+) | False | XLOC_004766 |
| TCONS_00009459 | other | downstream | 1919159 | 28945532 ~ 28945646 (+) | True | XLOC_004786 |
