Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU231747 |
| length | 799 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G171209 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035915.1 |
| NCBI id | CM008318.1 |
| chromosome length | 35429340 |
| location | 31836759 ~ 31895518 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU231731 | lncRNA | downstream | 120469 | 31715983 ~ 31716290 (-) | True | G171195 |
| TU231730 | lncRNA | downstream | 125278 | 31711109 ~ 31711481 (-) | True | G171194 |
| TU231729 | lncRNA | downstream | 165993 | 31670557 ~ 31670766 (-) | True | G171193 |
| TU231727 | lncRNA | downstream | 296965 | 31539566 ~ 31539794 (-) | True | G171191 |
| TU231723 | lncRNA | downstream | 367854 | 31468674 ~ 31468905 (-) | True | G171187 |
| TU231779 | lncRNA | upstream | 60300 | 31955818 ~ 31956701 (-) | True | G171230 |
| TU231780 | lncRNA | upstream | 61649 | 31957167 ~ 31960193 (-) | True | G171231 |
| TU231783 | lncRNA | upstream | 65763 | 31961281 ~ 31961574 (-) | True | G171232 |
| TU231787 | lncRNA | upstream | 70688 | 31966206 ~ 31967722 (-) | True | G171236 |
| TU231788 | lncRNA | upstream | 83573 | 31979091 ~ 31979292 (-) | True | G171237 |
| XM_007227885.3 | mRNA | downstream | 582352 | 31244773 ~ 31254407 (-) | True | LOC103022864 |
| XM_007227887.3 | mRNA | downstream | 593243 | 31232151 ~ 31243516 (-) | False | rcan1 |
| XM_022680559.1 | mRNA | downstream | 599478 | 31232151 ~ 31237281 (-) | True | rcan1 |
| XM_022680558.1 | mRNA | downstream | 606703 | 31228210 ~ 31230056 (-) | True | LOC107197676 |
| XM_022680012.1 | mRNA | downstream | 615428 | 31214924 ~ 31221331 (-) | False | mab21l3 |
| XM_022680563.1 | mRNA | upstream | 314 | 31895832 ~ 31904168 (-) | False | gabpa |
| XM_022680561.1 | mRNA | upstream | 314 | 31895832 ~ 31904168 (-) | False | gabpa |
| XM_022680562.1 | mRNA | upstream | 314 | 31895832 ~ 31903157 (-) | True | gabpa |
| XM_022680564.1 | mRNA | upstream | 8751 | 31904269 ~ 31912403 (-) | True | LOC103043487 |
| XM_007227873.3 | mRNA | upstream | 36873 | 31932391 ~ 31942213 (-) | True | LOC103045951 |
| TU231269 | other | downstream | 3149080 | 28686050 ~ 28687679 (-) | True | G170854 |
| TU230949 | other | downstream | 3933860 | 27900794 ~ 27902899 (-) | False | LOC111194963 |
| TU230416 | other | downstream | 5931277 | 25896595 ~ 25905482 (-) | False | LOC103030841 |
| TU230256 | other | downstream | 6327343 | 25502135 ~ 25509416 (-) | False | LOC111194864 |
| TU230159 | other | downstream | 7512254 | 24312583 ~ 24324505 (-) | True | G169980 |
| TU231746 | other | upstream | 4830 | 31900348 ~ 31903527 (-) | False | gabpa |
| TU232121 | other | upstream | 863000 | 32758518 ~ 32772132 (-) | True | ndp |
| TU232221 | other | upstream | 1278535 | 33174053 ~ 33176284 (-) | True | G171553 |
| XR_002651393.1 | other | upstream | 1318804 | 33214322 ~ 33235878 (-) | True | LOC103028031 |
| TU232866 | other | upstream | 3041787 | 34937305 ~ 34959712 (-) | False | rftn2 |
