Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU230949 |
| length | 794 |
| RNA type | TUCP |
| GC content | 0.46 |
| exon number | 4 |
| gene id | LOC111194963 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035915.1 |
| NCBI id | CM008318.1 |
| chromosome length | 35429340 |
| location | 27900191 ~ 27902899 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU230942 | lncRNA | downstream | 11117 | 27882680 ~ 27889677 (-) | True | G170611 |
| TU230943 | lncRNA | downstream | 11117 | 27888934 ~ 27889677 (-) | False | G170611 |
| TU230934 | lncRNA | downstream | 38242 | 27862156 ~ 27862552 (-) | True | G170603 |
| TU230907 | lncRNA | downstream | 49603 | 27845972 ~ 27851191 (-) | True | G170582 |
| XR_002651381.1 | lncRNA | downstream | 280007 | 27617687 ~ 27620787 (-) | True | LOC111194936 |
| TU230998 | lncRNA | upstream | 272436 | 28175335 ~ 28175654 (-) | True | G170657 |
| TU230999 | lncRNA | upstream | 276075 | 28178974 ~ 28179208 (-) | True | G170658 |
| TU231008 | lncRNA | upstream | 285589 | 28188488 ~ 28191125 (-) | True | G170661 |
| TU231034 | lncRNA | upstream | 524578 | 28427477 ~ 28427687 (-) | True | G170685 |
| TU231273 | lncRNA | upstream | 890373 | 28793272 ~ 28793875 (-) | True | G170858 |
| XM_007260403.3 | mRNA | downstream | 5907 | 27889747 ~ 27894887 (-) | True | LOC103028198 |
| XM_007260412.3 | mRNA | downstream | 57241 | 27836324 ~ 27843553 (-) | True | LOC103030840 |
| XM_007260410.3 | mRNA | downstream | 65321 | 27824339 ~ 27835473 (-) | True | LOC103030092 |
| XM_015608619.2 | mRNA | downstream | 77431 | 27815809 ~ 27823363 (-) | True | gtpbp8 |
| XM_015608620.2 | mRNA | downstream | 77438 | 27815809 ~ 27823356 (-) | False | gtpbp8 |
| XM_022680510.1 | mRNA | upstream | 194560 | 28097459 ~ 28153647 (-) | False | uxs1 |
| XM_007227947.3 | mRNA | upstream | 194560 | 28097459 ~ 28146553 (-) | True | uxs1 |
| XM_022680514.1 | mRNA | upstream | 278105 | 28181004 ~ 28249266 (-) | False | st6gal2 |
| XM_022680512.1 | mRNA | upstream | 278105 | 28181004 ~ 28249265 (-) | False | st6gal2 |
| XM_022680511.1 | mRNA | upstream | 278105 | 28181004 ~ 28249265 (-) | False | st6gal2 |
| TU230416 | other | downstream | 1995312 | 25896595 ~ 25905482 (-) | False | LOC103030841 |
| TU230256 | other | downstream | 2391378 | 25502135 ~ 25509416 (-) | False | LOC111194864 |
| TU230159 | other | downstream | 3576289 | 24312583 ~ 24324505 (-) | True | G169980 |
| TU229637 | other | downstream | 5005362 | 22894768 ~ 22895432 (-) | True | G169567 |
| TU229422 | other | downstream | 5542387 | 22338439 ~ 22358407 (-) | False | man1a2 |
| TU231269 | other | upstream | 783151 | 28686050 ~ 28687679 (-) | True | G170854 |
| TU231746 | other | upstream | 3997449 | 31900348 ~ 31903527 (-) | False | gabpa |
| TU232121 | other | upstream | 4855619 | 32758518 ~ 32772132 (-) | True | ndp |
| TU232221 | other | upstream | 5271154 | 33174053 ~ 33176284 (-) | True | G171553 |
| XR_002651393.1 | other | upstream | 5311423 | 33214322 ~ 33235878 (-) | True | LOC103028031 |
