Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU230998 |
| length | 320 |
| lncRNA type | inter_gene |
| GC content | 0.55 |
| exon number | 1 |
| gene id | G170657 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035915.1 |
| NCBI id | CM008318.1 |
| chromosome length | 35429340 |
| location | 28175335 ~ 28175654 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU230942 | lncRNA | downstream | 285658 | 27882680 ~ 27889677 (-) | True | G170611 |
| TU230943 | lncRNA | downstream | 285658 | 27888934 ~ 27889677 (-) | False | G170611 |
| TU230934 | lncRNA | downstream | 312783 | 27862156 ~ 27862552 (-) | True | G170603 |
| TU230907 | lncRNA | downstream | 324144 | 27845972 ~ 27851191 (-) | True | G170582 |
| XR_002651381.1 | lncRNA | downstream | 554548 | 27617687 ~ 27620787 (-) | True | LOC111194936 |
| TU230999 | lncRNA | upstream | 3320 | 28178974 ~ 28179208 (-) | True | G170658 |
| TU231008 | lncRNA | upstream | 12834 | 28188488 ~ 28191125 (-) | True | G170661 |
| TU231034 | lncRNA | upstream | 251823 | 28427477 ~ 28427687 (-) | True | G170685 |
| TU231273 | lncRNA | upstream | 617618 | 28793272 ~ 28793875 (-) | True | G170858 |
| TU231298 | lncRNA | upstream | 780806 | 28956460 ~ 28959010 (-) | True | G170875 |
| XM_022680510.1 | mRNA | downstream | 21688 | 28097459 ~ 28153647 (-) | False | uxs1 |
| XM_007227947.3 | mRNA | downstream | 28782 | 28097459 ~ 28146553 (-) | True | uxs1 |
| XM_022680673.1 | mRNA | downstream | 272485 | 27900191 ~ 27902850 (-) | True | LOC111194963 |
| XM_007260403.3 | mRNA | downstream | 280448 | 27889747 ~ 27894887 (-) | True | LOC103028198 |
| XM_007260412.3 | mRNA | downstream | 331782 | 27836324 ~ 27843553 (-) | True | LOC103030840 |
| XM_022680514.1 | mRNA | upstream | 5350 | 28181004 ~ 28249266 (-) | False | st6gal2 |
| XM_022680512.1 | mRNA | upstream | 5350 | 28181004 ~ 28249265 (-) | False | st6gal2 |
| XM_022680511.1 | mRNA | upstream | 5350 | 28181004 ~ 28249265 (-) | False | st6gal2 |
| XM_022680513.1 | mRNA | upstream | 5350 | 28181004 ~ 28249265 (-) | True | st6gal2 |
| XM_007227944.3 | mRNA | upstream | 136845 | 28312499 ~ 28327425 (-) | True | pdzk1 |
| TU230949 | other | downstream | 272436 | 27900794 ~ 27902899 (-) | False | LOC111194963 |
| TU230416 | other | downstream | 2269853 | 25896595 ~ 25905482 (-) | False | LOC103030841 |
| TU230256 | other | downstream | 2665919 | 25502135 ~ 25509416 (-) | False | LOC111194864 |
| TU230159 | other | downstream | 3850830 | 24312583 ~ 24324505 (-) | True | G169980 |
| TU229637 | other | downstream | 5279903 | 22894768 ~ 22895432 (-) | True | G169567 |
| TU231269 | other | upstream | 510396 | 28686050 ~ 28687679 (-) | True | G170854 |
| TU231746 | other | upstream | 3724694 | 31900348 ~ 31903527 (-) | False | gabpa |
| TU232121 | other | upstream | 4582864 | 32758518 ~ 32772132 (-) | True | ndp |
| TU232221 | other | upstream | 4998399 | 33174053 ~ 33176284 (-) | True | G171553 |
| XR_002651393.1 | other | upstream | 5038668 | 33214322 ~ 33235878 (-) | True | LOC103028031 |
