Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU230934 |
| length | 397 |
| lncRNA type | inter_gene |
| GC content | 0.32 |
| exon number | 1 |
| gene id | G170603 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035915.1 |
| NCBI id | CM008318.1 |
| chromosome length | 35429340 |
| location | 27862156 ~ 27862552 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU230907 | lncRNA | downstream | 10965 | 27845972 ~ 27851191 (-) | True | G170582 |
| XR_002651381.1 | lncRNA | downstream | 241369 | 27617687 ~ 27620787 (-) | True | LOC111194936 |
| TU230881 | lncRNA | downstream | 241373 | 27617745 ~ 27620783 (-) | False | LOC111194936 |
| TU230868 | lncRNA | downstream | 364517 | 27496098 ~ 27497639 (-) | True | G170549 |
| TU230862 | lncRNA | downstream | 381734 | 27479901 ~ 27480422 (-) | True | G170548 |
| TU230942 | lncRNA | upstream | 20128 | 27882680 ~ 27889677 (-) | True | G170611 |
| TU230943 | lncRNA | upstream | 26382 | 27888934 ~ 27889677 (-) | False | G170611 |
| TU230998 | lncRNA | upstream | 312783 | 28175335 ~ 28175654 (-) | True | G170657 |
| TU230999 | lncRNA | upstream | 316422 | 28178974 ~ 28179208 (-) | True | G170658 |
| TU231008 | lncRNA | upstream | 325936 | 28188488 ~ 28191125 (-) | True | G170661 |
| XM_007260412.3 | mRNA | downstream | 18603 | 27836324 ~ 27843553 (-) | True | LOC103030840 |
| XM_007260410.3 | mRNA | downstream | 26683 | 27824339 ~ 27835473 (-) | True | LOC103030092 |
| XM_015608619.2 | mRNA | downstream | 38793 | 27815809 ~ 27823363 (-) | True | gtpbp8 |
| XM_015608620.2 | mRNA | downstream | 38800 | 27815809 ~ 27823356 (-) | False | gtpbp8 |
| XM_015608618.2 | mRNA | downstream | 46396 | 27810358 ~ 27815760 (-) | True | slc10a2 |
| XM_007260403.3 | mRNA | upstream | 27195 | 27889747 ~ 27894887 (-) | True | LOC103028198 |
| XM_022680673.1 | mRNA | upstream | 37639 | 27900191 ~ 27902850 (-) | True | LOC111194963 |
| XM_022680510.1 | mRNA | upstream | 234907 | 28097459 ~ 28153647 (-) | False | uxs1 |
| XM_007227947.3 | mRNA | upstream | 234907 | 28097459 ~ 28146553 (-) | True | uxs1 |
| XM_022680514.1 | mRNA | upstream | 318452 | 28181004 ~ 28249266 (-) | False | st6gal2 |
| TU230416 | other | downstream | 1956674 | 25896595 ~ 25905482 (-) | False | LOC103030841 |
| TU230256 | other | downstream | 2352740 | 25502135 ~ 25509416 (-) | False | LOC111194864 |
| TU230159 | other | downstream | 3537651 | 24312583 ~ 24324505 (-) | True | G169980 |
| TU229637 | other | downstream | 4966724 | 22894768 ~ 22895432 (-) | True | G169567 |
| TU229422 | other | downstream | 5503749 | 22338439 ~ 22358407 (-) | False | man1a2 |
| TU230949 | other | upstream | 38242 | 27900794 ~ 27902899 (-) | False | LOC111194963 |
| TU231269 | other | upstream | 823498 | 28686050 ~ 28687679 (-) | True | G170854 |
| TU231746 | other | upstream | 4037796 | 31900348 ~ 31903527 (-) | False | gabpa |
| TU232121 | other | upstream | 4895966 | 32758518 ~ 32772132 (-) | True | ndp |
| TU232221 | other | upstream | 5311501 | 33174053 ~ 33176284 (-) | True | G171553 |
