Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007227768.3 |
| length | 1163 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 5 |
| gene id | sf3b1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035915.1 |
| NCBI id | CM008318.1 |
| chromosome length | 35429340 |
| location | 34880505 ~ 34896212 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU232794 | lncRNA | downstream | 55789 | 34835057 ~ 34835412 (-) | True | G171995 |
| TU232848 | lncRNA | downstream | 56825 | 34833723 ~ 34834376 (-) | True | G172027 |
| TU232837 | lncRNA | downstream | 71560 | 34813266 ~ 34819641 (-) | True | G172019 |
| TU232809 | lncRNA | downstream | 105308 | 34785639 ~ 34785893 (-) | True | G172007 |
| TU232792 | lncRNA | downstream | 224371 | 34642717 ~ 34666830 (-) | True | G171994 |
| TU232854 | lncRNA | upstream | 1997 | 34898209 ~ 34908956 (-) | True | G172032 |
| TU232858 | lncRNA | upstream | 25989 | 34922201 ~ 34924365 (-) | True | G172034 |
| TU232861 | lncRNA | upstream | 29911 | 34926123 ~ 34928686 (-) | True | G172037 |
| TU232857 | lncRNA | upstream | 36800 | 34933012 ~ 34935792 (-) | False | rftn2 |
| TU232867 | lncRNA | upstream | 50547 | 34946759 ~ 34983917 (-) | True | G172040 |
| XM_022680638.1 | mRNA | downstream | 12552 | 34840375 ~ 34878649 (-) | False | ankrd44 |
| XM_022680637.1 | mRNA | downstream | 12552 | 34840375 ~ 34878649 (-) | True | ankrd44 |
| XM_022680639.1 | mRNA | downstream | 12552 | 34840674 ~ 34878649 (-) | False | ankrd44 |
| XM_022680635.1 | mRNA | downstream | 69412 | 34819096 ~ 34821789 (-) | True | LOC111194949 |
| XM_022680634.1 | mRNA | downstream | 75282 | 34813427 ~ 34815919 (-) | True | LOC111194948 |
| XM_007227764.3 | mRNA | upstream | 13949 | 34910161 ~ 34920697 (-) | True | hspd1 |
| XM_022680009.1 | mRNA | upstream | 37976 | 34934188 ~ 34959753 (-) | True | rftn2 |
| XM_007227761.3 | mRNA | upstream | 285314 | 35181526 ~ 35251536 (-) | False | satb2 |
| XM_015603402.2 | mRNA | upstream | 285314 | 35181526 ~ 35251536 (-) | False | satb2 |
| XM_007227759.3 | mRNA | upstream | 285314 | 35181526 ~ 35251535 (-) | True | satb2 |
| XR_002651393.1 | other | downstream | 1655323 | 33214322 ~ 33235878 (-) | True | LOC103028031 |
| TU232221 | other | downstream | 1714917 | 33174053 ~ 33176284 (-) | True | G171553 |
| TU232121 | other | downstream | 2119069 | 32758518 ~ 32772132 (-) | True | ndp |
| TU231746 | other | downstream | 2987674 | 31900348 ~ 31903527 (-) | False | gabpa |
| TU231269 | other | downstream | 6203522 | 28686050 ~ 28687679 (-) | True | G170854 |
| TU232866 | other | upstream | 41093 | 34937305 ~ 34959712 (-) | False | rftn2 |
| TU232897 | other | upstream | 325503 | 35221715 ~ 35222225 (-) | True | G172060 |
| TU232919 | other | upstream | 474231 | 35370443 ~ 35371387 (-) | False | olig2 |
