Fish Single-cell RNA Database

GENE ID: ENSDARG00000036071

Symbol	Location	Gene type	Genome version	Species
gtf2h4	19: 27316467 ~ 27334394 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
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A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000036071 (gtf2h4), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000036064	cnep1r1	7: 38258749 ~ 38264380 (+)
ENSDARG00000051916	cdk7	5: 52000163 ~ 52010213 (-)
ENSDARG00000007657	ccnh	5: 47963940 ~ 47975440 (-)
ENSDARG00000067560	gtf2h3	5: 69650148 ~ 69660907 (+)
ENSDARG00000099139	fbxw5	5: 54446262 ~ 54482245 (-)
ENSDARG00000016514	gtf2h2	5: 26221011 ~ 26233068 (+)
ENSDARG00000032129	gtf2f1	3: 33921971 ~ 33941875 (-)
ENSDARG00000002402	ercc3	6: 9595414 ~ 9630081 (-)
ENSDARG00000103578	gtf2b	2: 22480074 ~ 22492289 (-)
ENSDARG00000012672	gtf2e2	1: 22851261 ~ 22876174 (+)
ENSDARG00000023678	ercc5	1: 474085 ~ 494280 (-)
ENSDARG00000075141	gprc5bb	1: 54673846 ~ 54680103 (+)
ENSDARG00000038114	xpa	1: 12068800 ~ 12097818 (+)
ENSDARG00000000542	gtf2e1	9: 27688274 ~ 27720612 (-)
ENSDARG00000057652	dbpb	16: 13599693 ~ 13613475 (-)
ENSDARG00000056099	gtf2h5	20: 26045253 ~ 26047787 (-)
ENSDARG00000003867	cdk20	8: 7494941 ~ 7504201 (-)
ENSDARG00000004527	pin4	14: 28432737 ~ 28437426 (+)
ENSDARG00000002077	mnat1	13: 31648271 ~ 31681951 (+)
ENSDARG00000068421	ttc9b	18: 36806545 ~ 36865386 (+)
ENSDARG00000058857	NA	18: 13123723 ~ 13133268 (-)
ENSDARG00000063690	nrm	19: 816208 ~ 822275 (+)
ENSDARG00000031795	abcf1	19: 30428913 ~ 30447743 (-)
ENSDARG00000056165	si:ch211-215a10.4	19: 30450125 ~ 30468234 (+)
ENSDARG00000036071	gtf2h4	19: 27316467 ~ 27334394 (-)
ENSDARG00000021985	ercc2	15: 23680018 ~ 23692359 (-)
ENSDARG00000037804	phlda3	23: 5756442 ~ 5759242 (-)
ENSDARG00000101894	stk10	21: 42785516 ~ 42831033 (-)
ENSDARG00000026701	gtf2h1	25: 3196855 ~ 3217115 (-)
--	si:ch211-260e23.7	--
--	zgc:101715	--

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish	NA	NA	NA
GSE158142 (5dpf)	brain, eye	baseline	5dpf, untreatment	NA	NA	NA
GSE158142 (8dpf)	brain, eye	baseline	8dpf, untreatment	NA	NA	NA
GSE158142 (15dpf)	brain, eye	baseline	15dpf, untreatment	NA	NA	NA
GSE151354 (wild type)	cartilage	baseline	21dpf, wild type	NA	NA	NA
GSE151354 (nkx3.2 mutant)	cartilage	growth	21dpf, nkx3.2 mutant	NA	NA	NA
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
PRJNA610520 (4.5dpf)	caudal hematopoietic tissue	baseline	4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	NA	NA	NA
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
GSE130526 (fin)	dorsal and anal fin	baseline	adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry	NA	NA	NA
GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells	NA	NA	NA
PRJNA706197 (24hpf)	embryo	baseline	24hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
GSE173972 (HET, ezh1+\|-)	embryo	hematopoietic	1.25dpf, Kdrl-positive embryos	NA	NA	NA
PRJNA706197 (12hpf)	embryo	baseline	12hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
GSE106587 (MZoep mutant)	embryo	baseline	12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo	NA	NA	NA
GSE158849 (labeled)	embryo	baseline	6hpf, WT, 4sUTP injected (labeled)	NA	NA	NA
PRJNA656271 (2dpf)	embryo	baseline	2dpf, FACS-isolated EGFP+ cells	NA	NA	NA
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE173972 (KO, ezh1-\|-)	embryo	hematopoietic	1.25dpf, Kdrl-positive embryos	NA	NA	NA
PRJNA734348 (dome, control)	embryo	baseline	4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
GSE126647 (Pbx4-depleted)	embryo	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells	NA	NA	NA
PRJNA706197 (1.25dpf)	embryo	baseline	1.25dpf, FACS sorted sox10:nEOS cells	NA	NA	NA
PRJNA706197 (14hpf)	embryo	baseline	14hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
PRJNA640816 (2dpf)	embryo	baseline	2dpf, FACS isolated -4.9sox10:EGFP+ cells	NA	NA	NA
GSE158849 (unlabeled)	embryo	baseline	6hpf, WT, 4sUTP injected (unlabeled)	NA	NA	NA
PRJNA656271 (24hpf)	embryo	baseline	24hpf, FACS-isolated EGFP+ cells	NA	NA	NA
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA706197 (18hpf)	embryo	baseline	18hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA706197 (20hpf)	embryo	baseline	20hpf, FACS sorted sox10:nEOS cells	NA	NA	NA
GSE173972 (WT, ezh1+\|+)	embryo	baseline	1.25dpf, Kdrl-positive embryos	NA	NA	NA
PRJNA640816 (2.9dpf)	embryo	baseline	2.9dpf, FACS isolated -4.9sox10:EGFP+ cells	NA	NA	NA
GSE106587 (WT)	embryo	baseline	12hpf, 6 somites, wild-type TLAB embryo	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
PRJNA656271 (1.5dpf)	embryo	baseline	1.5dpf, FACS-isolated EGFP+ cells

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)