GENE ID: ENSDARG00000093677


Symbol Location Gene type Genome version Species
si:ch211-56a11.2 24: 32406894 ~ 32408404 (-) protein_coding GRCz11 Danio rerio

MARKER



EXPRESSION


Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet Pancreas endocrine cells (cluster: 9)
marker
DOI:10.1038/nbt.4124
PRJNA656271 (24hpf) embryo baseline 24hpf, FACS-isolated EGFP+ cells
GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Neuron (cluster: 13)
potential marker
NA
GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment Neuron (cluster: 12)
potential marker
NA
PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment Ciliated (cluster: 4)
potential marker
NA
GSE148591 (6mpf) pituitary baseline 6mpf, male, Sox17:CreERT2 Corticotropes (cluster: 3)
potential marker
NA
GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis Corticotropes (cluster: 5)
Melanophores (cluster: 7)
potential marker
potential marker
NA
NA
GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg Bipolar cells (cluster: 13)
potential marker
NA
GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment Horizontal cells (cluster: 10)
Horizontal cells (cluster: 13)
potential marker
potential marker
NA
NA
GSE122680 (14dpf) retina baseline 14dpf, WT, untreatment Horizontal cells (cluster: 9)
potential marker
NA
GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment Horizontal cells (cluster: 12)
Horizontal cells (cluster: 12)
potential marker
potential marker
NA
NA
PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih Horizontal cells (cluster: 11)
potential marker
NA
PRJNA672101 (WT) retina baseline 5mpf, three retinas from WT zebrafsih Horizontal cells (cluster: 7)
potential marker
NA
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- HSPCs (cluster: 2)
potential marker
NA
PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish
PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain
GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment
GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment
GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment
PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/-
GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+
GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells
PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells
PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells
PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells
GSE106587 (MZoep mutant) embryo baseline 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo
GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos
GSE158849 (labeled) embryo baseline 6hpf, WT, 4sUTP injected (labeled)
GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA706197 (24hpf) embryo baseline 24hpf, FACS sorted sox10:nEOS cells
PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
GSE158849 (unlabeled) embryo baseline 6hpf, WT, 4sUTP injected (unlabeled)
GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos
PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells
PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA706197 (1.25dpf) embryo baseline 1.25dpf, FACS sorted sox10:nEOS cells
PRJNA706197 (12hpf) embryo baseline 12hpf, FACS sorted sox10:nEOS cells
GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos
GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo
PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum
GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment
GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment
GSE158142 (2dpf) head baseline 2dpf, untreatment
GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment
GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment
GSE158142 (3dpf) head baseline 3dpf, untreatment
GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment
GSE158142 (24hpf) head baseline 24hpf, untreatment
PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver
GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS
GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS
GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA
GSE150498 (nod2-|-, untreated) intestine disease 6dpf, nod2-/-, untreated
GSE137784 (HCC, HepABC) liver disease 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC
PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
GSE123241 (wild type) neuromast baseline 5dpf, wild type during sensory hair cell regeneration, lateral line sensory
GSE123241 (fgf3 mutants) neuromast regeneration 5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory
GSE123241 (fgf3 siblings) neuromast regeneration 5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory
PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days
PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours
PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS
GSE122680 (24hpf) retina baseline 24hpf, WT, untreatment
GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment
PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR)
PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR)
GSE152982 (wild type) trunk baseline 1.25dpf, untreatment
GSE163907 (24hpf) trunk baseline 24hpf, trunk tg(sox10:GFP) positive cells
GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -|-) whole body hematopoietic 6dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT
GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT
GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT

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