G1647487


Basic Information

Item Value
gene id G1647487
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 63242914 ~ 63243254 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1885087
tgaccatcctatcaatcctcgactttggcgatgtcatttacaaaatagcctccaataccctactcaacaaattggatgcagtctatcacagtgcaatccgttttgtcaccaaagccccatatactacccaccattgcgacctgtgcgctctcgttggctggccctcgcttcatactcatcgccaaacccactggctccatgtcatctacaagaccctgctaggtaaagtccccccttatctcagctcgctggtcaccatagcatctcccacctgtagcacacgctccagcaggtatatctctctagtaacccccaaaaccaattctttctttggccgcctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1885087 True 341 lncRNA 0.50 1 63242914 63243254

Neighbor

gene id symbol gene type direction distance location
pcnx1 pcnx1 coding upstream 10756 63153353 ~ 63232158 (+)
med6 med6 coding upstream 90285 63141423 ~ 63152629 (+)
map3k9 map3k9 coding upstream 139870 63050817 ~ 63103044 (+)
LOC100136022 NA coding upstream 202008 62885583 ~ 63042917 (+)
LOC110512290 LOC106600942 coding upstream 470958 62655733 ~ 62771956 (+)
LOC110498282 NA coding downstream 5368 63248622 ~ 63287372 (+)
LOC110498284 chp1 coding downstream 49315 63292569 ~ 63309243 (+)
LOC118941523 NA coding downstream 66094 63309348 ~ 63310641 (+)
LOC110498285 NA coding downstream 69621 63312561 ~ 63320421 (+)
LOC110498286 NA coding downstream 96531 63339785 ~ 63346292 (+)
G1647485 NA non-coding upstream 4014 63238641 ~ 63238900 (+)
G1647419 NA non-coding upstream 7474 63233439 ~ 63235440 (+)
G1647477 NA non-coding upstream 38857 63202756 ~ 63204057 (+)
G1647433 NA non-coding upstream 118790 63121767 ~ 63124124 (+)
G1647431 NA non-coding upstream 126083 63115757 ~ 63116831 (+)
G1647429 NA non-coding downstream 45570 63288824 ~ 63289248 (+)
G1647442 NA non-coding downstream 51905 63295159 ~ 63296728 (+)
G1647502 NA non-coding downstream 58657 63301911 ~ 63302540 (+)
G1647422 NA non-coding downstream 67703 63310957 ~ 63380175 (+)
G1647411 NA other upstream 165771 63075149 ~ 63077143 (+)
G1647342 NA other upstream 224226 63016955 ~ 63018688 (+)
srsf5a LOC106611464 other upstream 749195 62486921 ~ 62493719 (+)
G1646509 NA other upstream 1097624 62144183 ~ 62145290 (+)
LOC110498409 LOC106592792 other downstream 148371 63380908 ~ 63414582 (+)
G1648296 NA other downstream 884954 64128208 ~ 64129068 (+)
G1648608 NA other downstream 1737110 64980364 ~ 64980943 (+)
G1649268 NA other downstream 2218519 65461773 ~ 65463454 (+)
G1649291 NA other downstream 2301123 65544377 ~ 65545055 (+)

Expression


Co-expression Network