G68280


Basic Information

Item Value
gene id G68280
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 40801118 ~ 40851228 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU91203
gtgtgtgtgtgtatgtgtgtgtgtctgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtatgtctgttgaatgtgtgaatgtgtgtgtctgtgtctgtgtgtgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtctctgtgtgtgtgtgtctctgtgtgtctctttgtgtgtgtctctttgtgtctctgtgtgtgtgtctctgtgtgtctctgtgtgtgtgtctctttgtgtctctgtgtgtgtgtctctgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtctctgtgtgtgtgtctctgtgtgtctctgtgtgtctctgtgtgtctctgtgtgtgtgtctctgtgtgtgtgtctctgtgtgtctctgtctgtgtgtctctgtgtgtgtgtctctgtgtgtctctgtgtgtgtgtctct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91203 True 451 lncRNA 0.48 3 40801118 40851228

Neighbor

gene id symbol gene type direction distance location
tmc2b tmc1,LOC103356627 coding upstream 23073 40737947 ~ 40778045 (+)
tmc1 LOC104961758,LOC103356604,LOC106904573,LOC103470573 coding upstream 72297 40698916 ~ 40728821 (+)
es1 LOC102195758,LOC101474177,LOC100709427,LOC104961732 coding upstream 108059 40684239 ~ 40693059 (+)
tmem127 tmem127,LOC106585551 coding upstream 122843 40667325 ~ 40678275 (+)
snrnp200 snrnp200 coding upstream 158949 40566070 ~ 40642169 (+)
wu:fa19b12 NA coding downstream 27671 40878899 ~ 40883559 (+)
rorb rorb coding downstream 165425 41016653 ~ 41070906 (+)
LOC120560189 LOC104961756,LOC103367624,LOC102788780 coding downstream 371474 41222702 ~ 41254622 (+)
lsm1 lsm1,LOC103396910,LOC103398031 coding downstream 746999 41598227 ~ 41605767 (+)
LOC120560217 NA coding downstream 758704 41609932 ~ 41619652 (+)
G68289 NA non-coding upstream 15167 40785552 ~ 40785951 (+)
G68252 NA non-coding upstream 56097 40744324 ~ 40745021 (+)
G68251 NA non-coding upstream 75305 40725320 ~ 40725813 (+)
G68249 NA non-coding upstream 78822 40721759 ~ 40722296 (+)
G68233 NA non-coding upstream 82472 40649105 ~ 40718646 (+)
G68299 NA non-coding downstream 17202 40868430 ~ 40868992 (+)
G68277 NA non-coding downstream 20303 40871531 ~ 40903085 (+)
LOC120560183 NA non-coding downstream 35421 40886649 ~ 40917919 (+)
G68283 NA non-coding downstream 37105 40888333 ~ 40893153 (+)
G68286 NA non-coding downstream 41104 40892332 ~ 40892653 (+)
tmem230b tmem230,LOC101174675,LOC101077900,LOC105939206,LOC103146401,LOC102236919,LOC103356612,LOC107086812,LOC103399110,LOC103397697 other upstream 402995 40379395 ~ 40398123 (+)
G68173 NA other upstream 566527 40233473 ~ 40234591 (+)
vps33a vps33a other upstream 636693 40133766 ~ 40164425 (+)
LOC120560010 sds other upstream 922622 39862463 ~ 39878496 (+)
G68023 NA other upstream 1339640 39410222 ~ 39461478 (+)
G68285 NA other downstream 16019 40867247 ~ 40897108 (+)
trpm6 NA other downstream 40501 40891729 ~ 40949978 (+)
G68309 NA other downstream 132596 40983824 ~ 41070649 (+)
LOC120561096 NA other downstream 230379 41081607 ~ 41097796 (+)
anxa1a anxa1,LOC103133394,LOC103146482 other downstream 284549 41135777 ~ 41270849 (+)

Expression


Co-expression Network