matk (matk)


Basic Information

Item Value
gene id matk
gene name matk
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 14420490 ~ 14434974 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026926414.2
AGTGAGCAGCATGACATCAGTTCAGCAAAACTAGATAAACACATTCAGATCCTCATTTCCTCAGTGTGCGCCGTTGAATGCTGCATGGACATGGAGTTGTAAGCCGTTTACAGTGTGTGGAAATCTAATGctgctgtttcctctctctagCGATGTCTACGaaaacatgGCTTCCTGGTACACAGTGTGTCGCCAAAAGTGACCACACAAGACCTAAACCCAATGAAATCTTCTATCGCAAAGGAGATATCCTTACCATTTTAGGTTTGGAGTTGTTAATGggGAAGGCCATCTACAGAGCCAAGCACAACAGGACAGGTGAAGAAGGTCTGATCTTTGCTTCTAACATGCGAGAGCGTGAAGCCCTGCGTGTAGACCCCAGTCTCAGCCTCATGCCATGGTTCCATGGGAAGATCTCAGGTCCAGAGGCTGTCAGCAAACTGCAGCCGATGGAGGACGGCCTGTTTCTGGTACGCGAGTCCATTCGGCACCCTGGTGACTATGTCCTGTGTGTAAGCTTTAAGCAAGAGGTCCTTCATTACCATGTCATCTACCAGGAATCCAAGCTGACAATTGACAGGACCCAGTACTTCTACAACCTCATTGACATGGTGGAGTTCTACGCCAAGAACAAAGGCATTATTGCTACCACACTGCAGAAACCTAAAGAGAAAGAGGGCACTAAGTCTGCTGCACTGCAGCTCTCAAAAAtGGGCTGGCTATTAGATCTCTCAAAGCTAACTTTGGGAGAAAGTATTGGAAACGGCGAGTTTGGAGCGGTGTTTCAGGGTGAGTACATGGGCAGGAAGGTGGCAGTGAAAAACATAAAGTCTGATGTCACTGCTCAAGCTTTCCTGGACGAGACTTCTGTTATGACAAAACTGCAGCATAGGAATCTGGTGCAGTTATTAGGAGTGATTCTACACAATGGCCTCTACATCATCACAGAATTTATGGCAAAGGGTAATCTGGTGAATTACCTACGATCACGAGGTCGCTCAGTTATAACCACAGCTGAACTCCTGCAATACGCTCTAGATGTGTGTGAAGGCATGGAATATCTGGAGTCAAAGAAACTTGTACACCGGGACCTGGCTGCCCGTAACATCCTCATATCTGAGGACAATATTGCCAAAATCAGTGATTTTGGCCTGGCCATGGTTGACTGTCAGAGCATTGATGTTGCAAAGTTACCTGTGAAATGGACTGCACCTGAGGCCTTAAACAACAAGaagttcTCTACACGGTCAGATATTTGGAGTTACGGTGTGCTTCTATGGGAAACTTTCTCCTTTGGCAGACAGCCCTACCCCAAGATGACTCTGAAGGAGGTGAAGGAGAAAGTGGAGGAGGGATACCGCATGGAGCCGCCTGAAGACTGTCCATCTGAGATCTATGCCATCATGAGGCTCTGCTGGGAGAAGGACCCCAAAATGAGACCGTCATTCCATAAGCTCAAAGAGCATCTACAGGCTGAGCTGAACAAACACGAGTCCCCCACAGAGTCCTGACATCATTTTCTCCATTCGCACATCTGCTTTCTTCATAGCAGACCAGACATTTTATTCACAAATaattacactatactgtattgGACACAGTAACAAGGTTCCTGCTGTAACCTGTTCACCAAGAGTTGACACGGAATATACTCTCTATATGTCActtgctaatttatttttatttatctaacaCTTTATTTCAAAAGGACATTTCACAATGGATGTGTAATCTTCTTAAGTGAGGATACAGACCTCGAAGCAAAAGGCAGCATGAAgctcatatttatgttttgaaAGCTGGCAGAACTGAAAAGACAGTTATAAAATGTTGCTATGGACTGTGGATATATGGAAGGAATATGACCTGTGGCTCAACTCAGAAGATAAAATTAAGCAGCAAACCTTTGTGCTTAATTGAAATTTGTGGAGAAGAATCTCTCTTTAATCAACACATCTTAAGACTCAGTGCTACATTTTGGTCTGCTGAGAACTTTTGTTCTATACTGCATTTTTGAGAATTTTTCAAAGATaatttgtttgtctctctgtcttcagAGGATAAATGTAAACAGCACAAATGCAGGAGGAGAGACGGACTCTTCTGGGGATTAAAATTCAAGATCACGAGTA

Function

symbol description
matk Predicted to enable non-membrane spanning protein tyrosine kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human MATK (megakaryocyte-associated tyrosine kinase).

NR:

description
PREDICTED: megakaryocyte-associated tyrosine-protein kinase isoform X1

GO:

id name namespace
GO:0018108 peptidyl-tyrosine phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004713 protein tyrosine kinase activity molecular_function

KEGG:

id description
K08888 MATK; megakaryocyte-associated tyrosine kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026926414.2 True 2132 mRNA 0.44 13 14420490 14434974

Neighbor

gene id symbol gene type direction distance location
cherp cherp coding downstream 14995 14390531 ~ 14405495 (-)
calr3a calr3,calr3a,LOC107702625,LOC107717161,LOC107561598 coding downstream 37725 14375485 ~ 14382765 (-)
rad23ab LOC108271249,LOC107704496,LOC107717165 coding downstream 46462 14362323 ~ 14374028 (-)
fbn2b fbn3,fbn2b,LOC108441289,LOC106573567,LOC106613712 coding downstream 102653 14241303 ~ 14317837 (-)
uhrf1 uhrf1 coding downstream 240910 14165166 ~ 14179580 (-)
LOC113534236 NA coding upstream 82396 14517370 ~ 14521660 (-)
ttc39c ttc39c,LOC108270684,LOC108429509,LOC107653643,LOC107669847 coding upstream 92157 14527131 ~ 14548608 (-)
cts12 LOC108270686,LOC103033790 coding upstream 146570 14581544 ~ 14587731 (-)
plekhb2 plekhb2,LOC106613863 coding upstream 179666 14614640 ~ 14619685 (-)
stx6 stx6,LOC107715114,LOC107731540,LOC107669815,LOC107653648 coding upstream 218729 14653703 ~ 14666953 (-)
G181207 NA non-coding downstream 216759 14156503 ~ 14203731 (-)
G181205 NA non-coding downstream 283535 14136454 ~ 14136955 (-)
G181197 NA non-coding downstream 295567 14080499 ~ 14124923 (-)
G181128 NA non-coding downstream 364875 14055408 ~ 14055615 (-)
G181062 NA non-coding downstream 700733 13718323 ~ 13719757 (-)
G181298 NA non-coding upstream 327 14435301 ~ 14435614 (-)
G181401 NA non-coding upstream 46555 14481529 ~ 14483184 (-)
G181453 NA non-coding upstream 191461 14626435 ~ 14627355 (-)
G181462 NA non-coding upstream 201258 14636232 ~ 14636441 (-)
G181463 LOC108270690 non-coding upstream 202748 14637722 ~ 14638851 (-)
rx1 LOC108270609 other downstream 5421 14408726 ~ 14415069 (-)
LOC113527598 LOC108271251,LOC108441295,LOC107742801 other downstream 58843 14358520 ~ 14361647 (-)
ptprsa ptprs,ptprd,LOC107559826,LOC107679075 other downstream 637363 13546914 ~ 13783127 (-)
rpp21 LOC108271386 other downstream 1177290 13239723 ~ 13243200 (-)
rc3h1a rc3h1,LOC108429496 other downstream 1637955 12752078 ~ 12782535 (-)
zfr2 zfr2,LOC108271074,LOC107742797,LOC108430234 other upstream 2386 14437360 ~ 14460337 (-)
LOC113532209 LOC108271183 other upstream 52146 14487120 ~ 14493859 (-)
tnfaip8l1 tnfaip8l1,LOC107702643,LOC107727554,LOC107698600 other upstream 62176 14497150 ~ 14507610 (-)
lama3 LOC108270685 other upstream 115932 14550906 ~ 14579747 (-)
G182210 NA other upstream 1255800 15690774 ~ 15692350 (-)

Expression


Co-expression Network