XLOC_005668 (CU570800.2)


Basic Information

Item Value
gene id XLOC_005668
gene name CU570800.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 416648 ~ 417628 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00011272
ACAAACATGGACAATCGATCACTCCAGTACTGCTTCCCGAACAACAATCTGTCTTGTACCAAAAGTATCCGACCTGAAGCCGAGTACATGGTGGTGTACATTTTTGTGGGCGTAACATCAGTGTTCACCGTGTTCCTGAACTTGTTGGTGATCATTTCCATCTCACACTTCAAGCAGCTCCACACTCCGACCAATGTGTTGATTCTGTCTCTGGCAGTGGCTGATCTGATCGCAGGACTGATTCTCATGCCAGTGCAGGGAATGAAACTGATCGAGCCCTGCTGGTACTTTGGAGAAATGTTCTGCTCCATATTTCCTCTTATCCTCTATGTGGTCGTGGTGGCATCTCTGGGTAACATGATCATCGTGTCAGTGGACCGGTTCATTGCAGTGAATGACCCTTTACGATATCCACTGAAGGTCAACAACAGCAGAGTGGTCATTTCTATAGTTGTGAACTGGGTATTCTCCTTTCtgtattccttttatttattatacgaGTTTTTACTTCATCCGGAAACCACACACACTTGTATTGGAGAATGTGTACTTGTTGTTACACTGGAAAATCTAATAATCGATGCTTTGGTTTGTTTAATGGCACCGTGCTGCATCATCATCCCCTTATATGTGAAGATCTGCTATGTTGCGAAAAGGCAAGCAAAGCATTTAAATTCAGTCACAGAAAAAAAGGCCAAGTCTGAAAAGAAAGCAGCCAGAACCCTGGGCATCGTAGTGCTTGTTTATCTTCTGTTCTGGACTCCCTACTACATCGTGACTCTTTCATTTGGACATGATGAAAACGATGCGCTGATAATTAATGTGATGTACTGGTTGTTATGCATGAACTCCTGCATGAATCCGCTCATCTATGCCATGTTTTATCAGTGGTTTCGAGTGTCTGCAAAATATATATTGACTCTGAAAATATTTGAGCCTTCATCCAAATACTTAAACCTGTTCCCAGAAGCACACATGTAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000109278

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00011272 True 981 mRNA 0.43 1 416648 417628

Neighbor

gene id symbol gene type direction distance location
XLOC_005667 CU570800.3 coding upstream 4031 411607 ~ 412617 (+)
XLOC_005666 CU570800.4 coding upstream 9003 406635 ~ 407645 (+)
XLOC_005665 FO904836.1 coding upstream 12535 403103 ~ 404113 (+)
XLOC_005664 CU633838.1 coding upstream 53394 330555 ~ 363254 (+)
XLOC_005663 irf1a coding upstream 97821 311380 ~ 318827 (+)
XLOC_005669 lgi1a coding downstream 3603 421231 ~ 430143 (+)
XLOC_005670 CABZ01061569.1 coding downstream 20719 438347 ~ 438462 (+)
XLOC_005671 NA coding downstream 53920 471548 ~ 704338 (+)
XLOC_005672 fbxo28 coding downstream 65283 482911 ~ 490569 (+)
XLOC_005673 degs1 coding downstream 84602 502230 ~ 514843 (+)
XLOC_005661 NA non-coding upstream 147331 268042 ~ 269317 (+)
XLOC_005659 NA non-coding upstream 174029 242088 ~ 242619 (+)
XLOC_005656 NA non-coding upstream 206916 202760 ~ 209732 (+)
XLOC_005653 NA non-coding upstream 393473 20646 ~ 23175 (+)
XLOC_005652 NA non-coding upstream 396069 18808 ~ 20579 (+)
XLOC_005675 NA non-coding downstream 135963 553591 ~ 560985 (+)
XLOC_005685 NA non-coding downstream 441429 859057 ~ 861896 (+)
XLOC_005687 NA non-coding downstream 555381 973009 ~ 986263 (+)

Expression


Co-expression Network