G33581



Basic Information


Item Value
gene id G33581
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 14370825 ~ 14375113 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU38052
CGGGAGCAAACAGATAAACAGGAAGGATCTCCTTAGAGATAACCTCAAGGTCTTTGTGAGTGGGAGACCACCTGAATTGCACTTGTGAAGGGCTCACTCCTTGAGCAGTGGCCGCCCTCCAGCCTTCAGGTCCATTGTCAAAAGTTGAAGTGATGTTGTGAATGGAATATCCCTCAGCTGAGGAGCACACACTTGAATGGCCATTGCAAAAGCAGGGCAGACACTCCTCTGTATTATACGTAAGACGGCCATTTTTACGTGACCGACAGCTTAGCCTCAAATGCTCACATCCACTGGGAGTCACTTGAGAGCCATCTTGACAGCGGTCACACTTGTCTCCATAAATTCCCTGTTTACACGTACACCGTCCCTCATTGTTGCAGACTGGTCCTTGAGAACCTGCGGTGTTGCAGTTGCAAGCCACACAGTTGTCTCCTGCCCTCTGGTGGTAGTATCCTTCCTTGCATTTTTCACAGTGACGCCCTTCGGTGTTTCCCTGGCAGTTTATACAGTACAATCCTAGACGATCTGCTCTGCAGTACTGTGCTTTCCCATGACATGAACAAACACTGGAGGATTGAACTGTCCCGTGAACTGGATACCAGATGCAAACTGCGCACAGAAAGATCCAACTGCTCTTCATTTTCCACATCCAAGAAATAAGATTTAACGGCACGTTCTCTCTTTTATGTTGTCTGGTCGGTATTAAGGATACTGTCTGTCTGTTTAGTCCTCAGTGCGAGACGGACACCTAATGGTTGTGCCAGCTGATCCTTGCGCGGGCACTTAAAAACTTTCAACCTGACAAGCGCGGGCACGTCAAGCTCCGTGTCTCAATTGTATATTTACTCATGAGTGATTCACAGACTGATAGGAAATGTATCATGCCATTCCTCACATAAAGACGTGTTTGAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU38052 True 915 lncRNA 0.48 5 14370825 14375113

Neighbor


gene id symbol gene type direction distance location
CI01000004_14115087_14115790 TCTEX1D4 coding downstream 255035 14115005 ~ 14115790 (-)
CI01000004_14041671_14073418 TNW, TNN coding downstream 297055 14041076 ~ 14073770 (-)
CI01000004_13720679_13777075 PAPPA2 coding downstream 593750 13720457 ~ 13777075 (-)
CI01000004_13354130_13419831 BRINP2 coding downstream 950994 13354130 ~ 13419831 (-)
CI01000004_13208157_13210917 CENPL coding downstream 1159908 13207881 ~ 13210917 (-)
CI01000004_14389315_14396492 NMNAT2 coding upstream 13922 14389035 ~ 14396492 (-)
CI01000004_14425486_14425711 NA coding upstream 50251 14424179 ~ 14426902 (-)
CI01000004_14543631_14551256 NA coding upstream 166402 14541515 ~ 14551352 (-)
CI01000004_14557340_14560918 TRAC coding upstream 182168 14557281 ~ 14561042 (-)
CI01000004_14563131_14563558 NA coding upstream 186956 14562069 ~ 14563801 (-)
G33579 NA non-coding downstream 4419 14366154 ~ 14366406 (-)
G33443 NA non-coding downstream 14799 14351849 ~ 14356026 (-)
G33549 NA non-coding downstream 104637 14265737 ~ 14266188 (-)
G33480 NA non-coding downstream 227576 14142988 ~ 14143249 (-)
G33477 NA non-coding downstream 238314 14132293 ~ 14132511 (-)
G33583 NA non-coding upstream 3154 14378267 ~ 14378539 (-)
G33445 NA non-coding upstream 9616 14384729 ~ 14386358 (-)
G33441 NA non-coding upstream 42813 14417926 ~ 14419034 (-)
G33622 NA non-coding upstream 110903 14486016 ~ 14489846 (-)
G32207 NA other downstream 1986045 12376168 ~ 12384780 (-)
G32150 NA other downstream 2589874 11776519 ~ 11780951 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other downstream 2957918 11406957 ~ 11412907 (-)
G31203 NA other downstream 3620184 10746437 ~ 10750641 (-)
G30316 NA other downstream 4963904 9377937 ~ 9406921 (-)
G33746 NA other upstream 193680 14568793 ~ 14569264 (-)
G33750 NA other upstream 203345 14578458 ~ 14579001 (-)
G33755 NA other upstream 206293 14581406 ~ 14581873 (-)
G33756 NA other upstream 210058 14585171 ~ 14585745 (-)

Expression



Co-expression Network