G214784


Basic Information

Item Value
gene id G214784
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 4571831 ~ 4573556 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU243689
GATGGGATCTGGGATTCTCATCAACATAAGGATGATGTTACTGTACATCCCAGATGGTTAACGTCAGTTCTCTGATAAGCTTCTCAAGGGTTAACTGCGTAACCCTTGTCATTTAACATGCACAGGCAGAACATCTCAGGGTTAAAAGAGGCCCATCAGGCTTAAACATGATTTAGTGTTCAAGTTATGCAGATACACATAGGACACACTCTTAAAAAACAGAATGGAACAGATCACAGGGATTGTGAGGCAAAATTTTGACTAGTGGTTTTGTTACCAGTTTTATGTGCATTTGTAGCAAACAAGGCAAAAATAACCTTAGCACCATTAATAATAGCACAGACAAAATGCGAAAATGCATCCTGCATGTAAGCTTTCTTAGGGTTCTGGGGCCGAATCTGTGAATTTGCACCTGGAAAGATACACACCTTGCGCTTGCTTTTGTGTGAGCACAGTTCCTGAGCGCTGCATGTGGGTCTTCAGTAGCTGTGTGGCAGTAATGAGACTGGATTTCTGAGCTGGAGAAAGACCGACGGTCTTGGGTTTGGGACTGGCTGTAGGACTACTGCAGACACTGGACATATCCTCTGAACCAGACGGGGAGATGGGTACCCTCACAGCAGGTGAAGAGGGTCTTGACCTCTCAAGGTCAAAGGGTAGCTCACGACGTGGCTTTTTCTTCTTTTCTGCATCCAAATCTCGTGTTTCACCTGATCCATGACCATGACTCTCAGTACGGGTCAAAACTCCTGTCAGAAAATCAACTATCTCGTCCTGAAAACAAAGGGAAAAAAGATGAAGTCTAAAGAGGTCACACAAGACAGAAATTTTTGCATTAATCAGAGCTAACGTTTAAGGTCAGCTTTCCCTAAAAATAGACTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU243689 True 884 lncRNA 0.44 2 4571831 4573556

Neighbor

gene id symbol gene type direction distance location
CI01000050_04430129_04436139 NA coding upstream 134374 4429979 ~ 4437457 (+)
CI01000050_04406761_04429903 DISP3 coding upstream 141928 4406761 ~ 4429903 (+)
CI01000050_04303341_04330327 DNM1L coding upstream 240590 4303341 ~ 4331241 (+)
CI01000050_04281992_04287535 NA coding upstream 284029 4281992 ~ 4287802 (+)
CI01000050_04275924_04277061 NA coding upstream 294184 4275924 ~ 4277647 (+)
CI01000050_04591548_04592778 NA coding downstream 16370 4589926 ~ 4593049 (+)
CI01000050_04617015_04691858 ANTXR1A, ANTXRL, ANTXR1 coding downstream 43181 4616737 ~ 4691974 (+)
CI01000050_04700488_04701991 NA coding downstream 126788 4700344 ~ 4702040 (+)
CI01000050_04759894_04762802 NA coding downstream 186338 4759823 ~ 4763101 (+)
CI01000050_04865991_04906702 AGTPBP1 coding downstream 292350 4865906 ~ 4907415 (+)
G214868 NA non-coding upstream 11635 4559580 ~ 4560196 (+)
G214862 NA non-coding upstream 23931 4547570 ~ 4547900 (+)
G214795 NA non-coding upstream 28794 4506759 ~ 4543037 (+)
G214822 NA non-coding upstream 59372 4472831 ~ 4512459 (+)
G214787 NA non-coding upstream 62964 4508495 ~ 4508867 (+)
G214875 NA non-coding downstream 15133 4588689 ~ 4589499 (+)
G214877 NA non-coding downstream 25416 4598972 ~ 4601810 (+)
G214930 NA non-coding downstream 132365 4705921 ~ 4707929 (+)
G215309 NA non-coding downstream 175085 4748641 ~ 4748911 (+)
G214717 NA other upstream 463551 4107582 ~ 4108280 (+)
CI01000050_03938328_03956122 RHOBTB2 other upstream 614787 3931890 ~ 3957044 (+)
CI01000050_03807697_03808793 CLCN5B, CLCN5 other upstream 763092 3805143 ~ 3808870 (+)
CI01000050_02852118_02864754 RNF122 other upstream 1706009 2852118 ~ 2865822 (+)
G212927 NA other upstream 1796698 2774839 ~ 2775133 (+)
CI01000050_05407682_05409108 FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other downstream 834029 5407585 ~ 5409417 (+)
G215539 NA other downstream 1056054 5629610 ~ 5631203 (+)
G215773 NA other downstream 2087632 6661188 ~ 6665703 (+)

Expression


Co-expression Network