RNA id: XM_043258795.1


Basic Information

Item Value
RNA id XM_043258795.1
length 4813
RNA type mRNA
GC content 0.42
exon number 15
gene id LOC122358868
representative True

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 7062700 ~ 7074258 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACTGCTGAAGTTAATTATGCGttcaattaatcaaataacATTTAGTCTTATTTCTAGAGATTAGTacacatgtaattatttatgttatacTACTAAAGGAATTCACCCCATCAGCAATCGTTATCATCTGAATTAATATCTTGTGTAATCCAACAATGGTTCGGATATACCTGCGCTGAGAAAAGTGACACGCATCACGtgacaatccaaaaaaaaattaaattgtttttcaaTTTAGTTTATATCATATCTTTAATAGtctattttggttttctttgatattaaaaacaaagattttcaAGCGTGTGCTCCAAATTAACCCAATGAATTGTGGGAAATTATAGCCGTTTCTTAAACGTATGAAGGCAgtcctgtttgtttcagttaacTAAACATTATATTCGAGGGGTCATGaacataataaaactatttacacTTCATCAAGAATAATTCTCCAATTTATAGCCTGTTAgtctattattttattgcaagaCAAAAGGAAAACACTGCAGTGACACGCGATGCACAAAGGAGACAAAATCTCGATCTTTAGGAAATAATGTAGTATCGTTGAGAGATTTTAAAGTTTTCACAGAACATTCTTAACTGACTAGAACAGCTAAAGCgccaaaataattatttaaattctttaCTTCAAAGTGGGATTTTGCTAACTATTTTAGTGCTAACAATTCATCTCTCCTTTGTGAATGCATTCTTTAAACAAACATCATAAAGGCTGCTTTAAAagattctaaaaatataaatgaaaatcagCGGACAGGCCATCAGCTCCTGGAGATTATCCAAAACGTACTATTGCTCAACTCAGTCAAAACATATATGACTATTAATGCAAATGAATCAGATGAatataattactaattaaaagaGATCAAATTAAAGCGCATGTTTAGCCATTTTTAGCATCTTtctatgcatgcatttatatgaattGAATTACGTTACAAAGACGAATATTAAACAATGCGTGCGTTAGAAATGTCCCTTTACTTGATTGCTGATCGGTGCGGAATAAAGCCCAGAATAAAGTCCGCAAGGGACATTTTAATGAGCCTAATGTAAAAACGCGCTCCGAACAGACTGCGCTCGGCCAGTCCCTCAGGGTCACGCGCTCTCGTTCACCCGGCGCGCGCTGCAGCGGACGTCTCGCGCTTGTGTGTTTTCCTCAGTTAAGCACGGGGGCCACCGAGGCGAATGGCCAATAACTACCAATGGACTGTTAAAGGATGCACTAATTATTGACTTTGCCTTTCACGTGCCCAAGGATAACAGCTGACAGAGAAATGTATGGATTCATCAACACATGTCTGAAGTCTCTAGTGATTGACCGATTTGGTGAAGAAACGTGGGACAGACTGAGGGATGCAGCAAGAGTTCAAGACACTTTCATGACCTACGAAGTGTACACAGATAACATCACCATGCAGTTAGTGACGGAGGCCTGCAAGATGCTCGGCCTGGAGCAAAGTGCTGTGCTGGGGCAGTTtggagaatatttttttgagtTCTGCAAAAGGGCCGGGTATGATCACATGCTGCGGACGCTTGGAGGAAATCTGTTCGATTTCATGGAGAATCTGGACGCGCTGCACGgctatctctctctttcctaCAAGgaaATGAATGCACCATCATTCCGGGTGGAAAAAAACAACGATGGCACTTTGCTGTTACACTACTACTCAGATCGACGAGGTCTTGGCCATATCGTCCCTGGCATCATCGGAGCTGTTGCTAAAGACTTCTTCAACAGCAAGATAAAGATGGAGATTGTGAACCAGATCGAGGAAGTCGAGAGGATGGGAAAAAAGGAGCACATTGTTTTCCTCATCACCCAGAGCCCAGTGATCCTAGACAAAGTGTGCAGTAAaaGTGAAACTTTAAGTGCGTTTGAGCCTGTGTATCCAGAGAATCTGTGCATCGATCTGAAGACGTTTTGCAATGCCTTTCCTTTCCACATTGTGTTTGATGAAGAACTTCGCGTCAGACAGACAGGGGTGAGCATTCAGAGAGTCGTGGCCGGGTTACAGAGCAGGGGTGGCCTGCTGGATCAGTATTTCGACATCCGGCATCCGCAGGTGACTTTCAACATCTGCAGCATCCGCAAGTTCATTAACAGCCATTTCGTTTTGCGGACTCGGAGAGACAGAATGCCTGTGGCTTGGAGAGAGAGACCCGTGCTGGAGCTGAGAGGGAATATCAACCATTTCTCCTTCCTTCTCCCAGGACAAATGTTATGGATGCCTTCGTTGCGCTGCATGCTGTACCTAGCATCACCATTACTTCGCAGCttgcaggagctggaggagcaCTGCATGCATctttctgatattgctccacACGACGCTACGCGTGATCTGATCCTGCTCAACCAGCAGCGGCTGGCGGAGATGGAGCTCTCCAACCAGCTAGAACGAAAAAAGGAAGAGCTGCATCAGCTCTCAAAACACCTCGAGGAGGAAAAGCAGAAGACGGAGAATCTGCTGTATGCCATGCTGCCCAAACATGTGGCCAACCAGCTGAAAGAGGGCAAGAGAGTGGAGGCAGgtGAGTTTGAAGAGTGCACCGTCCTCTTCAGCGATGTGGTGACCTTCACCAACATCTGCTCTGAGTGCGAACCCATCCAGATTGTTTCCATGCTCAATTCCATGTATCTCAAGTTTGACCGTCTTACCACTGTACACAATGTTTACAAAGTTGAGACGATTGGAGATGCTTACATGGTTGTCGGTGGCGTGCCCATCCCAATGTCAAGTCACACTGAGCGTGTGGCTAACTTCGCCCTGGGCATGACCATTGCAGCAAAAGAGGTCACTAACCCTGTGACTGGTGGCCCTATTCAGATTCGAGTGGGCTTGCACAGCGGACCGGTCTTGGCAGGGGTGGTTGGTGAGAAGATGCCTCGGTATTGTTTGTTTGGAGACACAGTTAATACGGCCTCCCGAATGGAGAGTCATGGACTGCCTGACAAAATCCACCTCAGTCCCAGTGTTTATCATGCTCTAAGAAATAAAGGCTATCAGATGGAGGAGCGTGGAGAGATAGAGGTAAAAGGTAAAGGAAGAATGTGCACCTACTTCCTGCAGAGGAACCTAAAAGTCACAGAGAGTGAGATAATGGGGCTTTTGGTGCCCAACGTTGACTCAGACAGGAAGATGAATCATTCAACACAAGCTTCAAAGCTACTTCACTACAGGCCAGCATTAAAAGcTACCCAGAGACTACAGAAAGGAGACAGCTTTCCAATGGTACCAATGAAATACGGAGATAGCCCAACAGAGAGCAAACCTCCCACAAGATTTTCTGAACCTCAGCACAGCTCTGCCACAGGTAAGCCGCGAGACTCGGAGAGCTATGGGAGTCTTTACAGCGAGGACGAGTCCTCTGAGCTCACGAAGGACGGCACACCCAACACGACAGCTGAGAAACGCAGCAAACACGTTCACACTGGGTTCTGCTCGTTATTCTGACCTGAGCTGTTATGTAACATGTAACGTGGAAAACGTAAGACAAGCTAATGGTCGTATACTAAATCGTTTATGAAGATTTTAAAGCGAAATAGCCTATGAGAAACATATTTCCTGTGCCTGTTATGTAAATGAGGGCCTTTGTGTTACATGTGGGTTAAATAGGTAAGTGAAACCTAAAAGAAATTTCATCCCCTGAGCAATAATTGATTTCAGGAGTGAAAAAAAGACTTTGATACTTTGTGCATTTTCTTTATCTTAACCTagtaatactactactactaataatagtgTAAACCTTCTTTGGCTTTCTCTTCCTTGTAGCAAAATTGTCACTGccttaatacattttaatataatttaatatcagTTTTCGTATAAAcggatatttcacccaaaaatgaaaattctatcatcatttacttaacCTCAAGTTGTTTAGAAGCTGtgtgagtttttttattatgcttaacACAAAAGTAGATATTTTAGAAAGATATtggtaatcaaacagttgatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatcatggaAGTCAATGTTACCGTCAGTTGTCTTGTTCTTCGAAATATTTTCCACCGCTTTGGACCAACTTGAGGAACTATGAGTAACTATAACAGAATTTTAAGTTTTGGgagaactatcactttaaacatgtttttaggTAAACTGCTATGTTAAAATCGAGCATGCtaacactgaataaaatagtGGGAGATTTTGCAGAGAACAAACTGATGTAAGTAATACTCATTAAAAGCACTATGAACTAATTACACCAAACTCTGTATATTGAGCAGGAAGCGCATTTCTCCCCTTTTTCTTTACGCAAGCGGACACCCGATCCAGACGGGAGAGCCGGACTGACAGGTCATCGGACGAGACCGTGGGACTTGAGTTTCTTAAGCTGGATGAATTTGAGAAACCAAATCTGTAACAGGAGTCAAAGCGTTGAGGTCAGGTGTGGGTATTAATTCACCGCAGCACTAAAAACCGCACTACTGCGCTTCCTCTTTGTCAGCTTCACAAGCATCGGTTTTGTGGGAGTTTCTGTTTTTCCCGCCATTAGTTTGGGCTTCACGAGTCTGTTTCCTCTATCGCTTGGAGTTCACAGGTGCTTCTCTCGGACAGGTGCTCGGTCAGTACAGGTCGATTGGTGTAAATGTCGTCCACTGGCAACAGGAACGTTACCGTCTTGACTTTGGCTCTACAATGTTATTAACACATGAGTTACTAAATATTAGTTAACGTTTAAAACCGACTAAA

Function

GO: NA

KEGG:

id description
K12319 GUCY1B; guanylate cyclase soluble subunit beta

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU154033 lncRNA downstream 23508 7037726 ~ 7039192 (-) True G104314
TU154011 lncRNA downstream 25870 6806292 ~ 7036830 (-) True G104294
XR_006252639.1 lncRNA downstream 142440 6919910 ~ 6920260 (-) True LOC122358744
XR_006252640.1 lncRNA downstream 221008 6841336 ~ 6841692 (-) True LOC122358745
TU153965 lncRNA downstream 341725 6719071 ~ 6720975 (-) True G104255
TU154424 lncRNA upstream 415848 7490106 ~ 7490776 (-) True G104570
TU154431 lncRNA upstream 422728 7496986 ~ 7497259 (-) True G104572
TU154447 lncRNA upstream 435876 7510134 ~ 7513305 (-) True G104585
TU154452 lncRNA upstream 449568 7523826 ~ 7524108 (-) True G104589
TU154458 lncRNA upstream 471698 7545956 ~ 7547059 (-) True G104595
XM_043258573.1 mRNA downstream 39236 6799376 ~ 7023464 (-) True LOC122358733
XM_043258563.1 mRNA downstream 68516 6985330 ~ 6994184 (-) True LOC122358727
XM_043258564.1 mRNA downstream 202909 6841945 ~ 6859791 (-) True LOC122358728
XM_043258474.1 mRNA downstream 341506 6669847 ~ 6721194 (-) True LOC122358587
XM_043258416.1 mRNA downstream 430788 6630756 ~ 6631912 (-) True LOC122358559
XM_043259221.1 mRNA upstream 36998 7111256 ~ 7119227 (-) True mmp28
XM_043259216.1 mRNA upstream 45804 7120062 ~ 7126137 (-) False taf15
XM_043259217.1 mRNA upstream 45804 7120062 ~ 7126137 (-) False taf15
XM_043259215.1 mRNA upstream 45804 7120062 ~ 7126136 (-) True taf15
XM_043259220.1 mRNA upstream 45804 7120062 ~ 7126109 (-) False taf15
TU153584 other downstream 916183 6146173 ~ 6146517 (-) True G104011
TU153427 other downstream 1313361 5744532 ~ 5749339 (-) False pgm2l1
TU153319 other downstream 1623753 5438048 ~ 5438947 (-) True G103825
TU152826 other downstream 3245958 3816062 ~ 3816742 (-) True G103449
TU152821 other downstream 3307533 3753341 ~ 3755167 (-) False LOC122359312
TU154060 other upstream 40168 7114426 ~ 7119286 (-) False mmp28
TU154467 other upstream 495588 7569846 ~ 7572090 (-) True G104603
TU154509 other upstream 565386 7639644 ~ 7640339 (-) False G104628
TU154511 other upstream 565386 7639644 ~ 7640339 (-) False G104628
TU154597 other upstream 883578 7957836 ~ 7958231 (-) True G104695

Expression Profile