RNA id: TU153965


Basic Information

Item Value
RNA id TU153965
length 1426
lncRNA type sense_over
GC content 0.43
exon number 6
gene id G104255
representative True

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 6719071 ~ 6720975 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GAAAGACCAAAACCCAGAGTGAACATTAAACCTGATCAACATGTGTTCAGAGGAGAAACAGTCACTCTCAGATGTGACATATATGATAAAGGAGTCACTAGCTGGAGATACAGCTGGTATAAAGATAATTCAAGAAGAGTTTTCAGTGATGGACAGGAACACACATTCAGTTCTGTTACTGAGTCTGACTCAGGTGAATACTCCTGTGAAGGATCAGAGATCAGAGGATCACGCCGGTCACACACGAGTGATAAAGTTACTCTGAAAGTATCAGATCCCAAATCAGTTTTAAGTGTTTCTCCACAGAAGTGGTTGACTGAAGGAGATCCAGTGACTTGATCTGTGAGGTTCTACAACTTCTCTACAGGCTGGACGTTCAGCTGGTTCACTTTAACTGAATCACCAGGTGGTTATCATCTGctctcagacagcagcagaggagcaggaggaagaTACAGGATCAGTTCTGCTGCTGTAGATCACACAGGAGTTTATGTgtgcagagcagagagagagaaatcatcTTATAAAACACAGTACAGCAACAAACAGCTGCTGTGGGTCACCGGTGTTTCTGCTCCAGTCTCTCTGAGGGTCAGTCCCAGCAGAACTCAACACTTCAcatctgactctctctctctgagctgtgaAGACCAGAGTAACTCTACTGTATGGAGAGTGAAAAGATACACAGACAGTGATCTGGAAGATTGTTCATCAATACCTCGAGGATCACACACAGGATCTACATGTACAATCAGTTACGTCTATACATCACTCACTGGAGTGTACTGGTGTGAGTCTGAATCTGGAGAGAAACATCATCCTGTTAATATCACTGTACACTCTGAAGTGATTCTGGAGAGTCCTGTTCATCCTGTGACTGAAGGAGATAGTCTGACTCTACGCTGTTTATATCAATACACAACTCCATCAAACCTCAGAGCTGATTTCTATAAAGATGGATCACTCATCCAGAATCAAAATACAGAGATGATCATCTCTCCTGTCTCAAAGTCACACGAGGGTTTCTACTCCTGCAAACACCCAGAGAGAGGAGAGTCACCCAAGAGCTGGATCTCAGTCAGACCTTCTACAGGCTCAGTATCTGAGGATCTCAAACCCATGATAATTGGAGTAACAGCAGGACTGACTGCAGTCTTCATTGTTGTCTTCTTGGTTCTGCTCTGGTGCTACAGAAACAACAAAggtctttttaattttacatcatACATTTACAGACGCTGACTCTGTTCCTAATCAGCTGGTTGAGATGGTTTTCTGCTCTTAACTGGTCTCCCAAACCTGGTAAAGATGTTTTTTAGACTGAGTTTAGAAGGTTTCTAGGCAGTTTTCAactgcattcttcaaaataaaggaTCCAGAAGGTCTGCTATAAAGagctttttgttaattgaaaatTTTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU153994 lncRNA downstream 544 6717807 ~ 6718527 (-) True LOC122358743
XR_006252638.1 lncRNA downstream 656 6718065 ~ 6718415 (-) False LOC122358743
TU153968 lncRNA downstream 103532 6614294 ~ 6615539 (-) True G104258
TU153948 lncRNA downstream 229570 6488798 ~ 6489501 (-) True G104249
XR_006252629.1 lncRNA downstream 232105 6485812 ~ 6486966 (-) True LOC122358561
TU154011 lncRNA upstream 85317 6806292 ~ 7036830 (-) True G104294
XR_006252640.1 lncRNA upstream 120361 6841336 ~ 6841692 (-) True LOC122358745
XR_006252639.1 lncRNA upstream 198935 6919910 ~ 6920260 (-) True LOC122358744
TU154033 lncRNA upstream 316751 7037726 ~ 7039192 (-) True G104314
TU153959 lncRNA upstream 321419 7042394 ~ 7098067 (-) False G104252
XM_043258416.1 mRNA downstream 87159 6630756 ~ 6631912 (-) True LOC122358559
XM_043259711.1 mRNA downstream 114858 6582796 ~ 6604213 (-) True LOC122359418
XM_043259709.1 mRNA downstream 170836 6542868 ~ 6548235 (-) True LOC122359416
XM_043258880.1 mRNA downstream 306376 6397789 ~ 6412695 (-) False LOC122358910
XM_043258573.1 mRNA upstream 78401 6799376 ~ 7023464 (-) True LOC122358733
XM_043258564.1 mRNA upstream 120970 6841945 ~ 6859791 (-) True LOC122358728
XM_043258563.1 mRNA upstream 264355 6985330 ~ 6994184 (-) True LOC122358727
XM_043258796.1 mRNA upstream 341725 7062700 ~ 7074258 (-) False LOC122358868
XM_043258795.1 mRNA upstream 341725 7062700 ~ 7074258 (-) True LOC122358868
TU153584 other downstream 572554 6146173 ~ 6146517 (-) True G104011
TU153427 other downstream 969732 5744532 ~ 5749339 (-) False pgm2l1
TU153319 other downstream 1280124 5438048 ~ 5438947 (-) True G103825
TU152826 other downstream 2902329 3816062 ~ 3816742 (-) True G103449
TU152821 other downstream 2963904 3753341 ~ 3755167 (-) False LOC122359312
TU154060 other upstream 393451 7114426 ~ 7119286 (-) False mmp28
TU154467 other upstream 848871 7569846 ~ 7572090 (-) True G104603
TU154509 other upstream 918669 7639644 ~ 7640339 (-) False G104628
TU154511 other upstream 918669 7639644 ~ 7640339 (-) False G104628
TU154597 other upstream 1236861 7957836 ~ 7958231 (-) True G104695

Expression Profile