RNA id: XR_006252638.1



Basic Information


Item Value
RNA id XR_006252638.1
length 248
lncRNA type intronic
GC content 0.38
exon number 2
gene id LOC122358743
representative False

Chromosome Information


Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 6717807 ~ 6718527 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AAAAAGCGGAGAgttctgaatgtttttactctaaactcaaactgaaaacagatcaAGGTGCTGGATCAAATGATGTGACGTATGCTCAGGTTAAATAGAAATGACAAGAATCCCGGGATACTGATTTCTGTTGAGAAGAGCTGACCAGGATCTTCAATGCTGTGTAATAACCTTTATTGAGCACCTGATGTCAGTAGATTTATCAGAACTTAATATTAGAGATTCAAACCCTCGTGTGAGTCAAAAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU153968 lncRNA downstream 102526 6614294 ~ 6615539 (-) True G104258
TU153948 lncRNA downstream 228564 6488798 ~ 6489501 (-) True G104249
XR_006252629.1 lncRNA downstream 231099 6485812 ~ 6486966 (-) True LOC122358561
TU153930 lncRNA downstream 253204 6464364 ~ 6464861 (-) True G104240
TU153924 lncRNA downstream 289928 6425929 ~ 6428137 (-) True G104236
XR_006252637.1 lncRNA upstream 650 6719065 ~ 6720572 (-) True LOC122358742
TU153965 lncRNA upstream 656 6719071 ~ 6720975 (-) True G104255
TU154011 lncRNA upstream 87877 6806292 ~ 7036830 (-) True G104294
XR_006252640.1 lncRNA upstream 122921 6841336 ~ 6841692 (-) True LOC122358745
XR_006252639.1 lncRNA upstream 201495 6919910 ~ 6920260 (-) True LOC122358744
XM_043258416.1 mRNA downstream 86153 6630756 ~ 6631912 (-) True LOC122358559
XM_043259711.1 mRNA downstream 113852 6582796 ~ 6604213 (-) True LOC122359418
XM_043259709.1 mRNA downstream 169830 6542868 ~ 6548235 (-) True LOC122359416
XM_043258880.1 mRNA downstream 305370 6397789 ~ 6412695 (-) False LOC122358910
XM_043258573.1 mRNA upstream 80961 6799376 ~ 7023464 (-) True LOC122358733
XM_043258564.1 mRNA upstream 123530 6841945 ~ 6859791 (-) True LOC122358728
XM_043258563.1 mRNA upstream 266915 6985330 ~ 6994184 (-) True LOC122358727
XM_043258796.1 mRNA upstream 344285 7062700 ~ 7074258 (-) False LOC122358868
XM_043258795.1 mRNA upstream 344285 7062700 ~ 7074258 (-) True LOC122358868
TU153584 other downstream 571548 6146173 ~ 6146517 (-) True G104011
TU153427 other downstream 968726 5744532 ~ 5749339 (-) False pgm2l1
TU153319 other downstream 1279118 5438048 ~ 5438947 (-) True G103825
TU152826 other downstream 2901323 3816062 ~ 3816742 (-) True G103449
TU152821 other downstream 2962898 3753341 ~ 3755167 (-) False LOC122359312
TU154060 other upstream 396011 7114426 ~ 7119286 (-) False mmp28
TU154467 other upstream 851431 7569846 ~ 7572090 (-) True G104603
TU154509 other upstream 921229 7639644 ~ 7640339 (-) False G104628
TU154511 other upstream 921229 7639644 ~ 7640339 (-) False G104628
TU154597 other upstream 1239421 7957836 ~ 7958231 (-) True G104695

Expression Profile