Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_022673443.1 |
| length | 660 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 4 |
| gene id | LOC111193320 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035906.1 |
| NCBI id | CM008309.1 |
| chromosome length | 35377769 |
| location | 7728539 ~ 7735786 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0002040 | sprouting angiogenesis | biological_process |
| GO:0016936 | galactoside binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU119536 | lncRNA | upstream | 14348 | 7669255 ~ 7714191 (+) | True | G88867 |
| TU119467 | lncRNA | upstream | 251289 | 7426023 ~ 7477250 (+) | True | G88801 |
| TU119464 | lncRNA | upstream | 332729 | 7352453 ~ 7395810 (+) | True | G88799 |
| TU119461 | lncRNA | upstream | 390847 | 7283189 ~ 7337692 (+) | False | G88798 |
| TU119463 | lncRNA | upstream | 390847 | 7283189 ~ 7337692 (+) | False | G88798 |
| TU119557 | lncRNA | downstream | 3635 | 7739421 ~ 7740934 (+) | True | G88886 |
| TU119583 | lncRNA | downstream | 119083 | 7854869 ~ 7855150 (+) | True | G88906 |
| TU119585 | lncRNA | downstream | 121595 | 7857381 ~ 7857621 (+) | True | G88908 |
| TU119595 | lncRNA | downstream | 133990 | 7869776 ~ 7871020 (+) | True | G88917 |
| TU119598 | lncRNA | downstream | 137291 | 7873077 ~ 7873431 (+) | True | G88919 |
| XM_022673437.1 | mRNA | upstream | 401791 | 7268729 ~ 7326748 (+) | False | vopp1 |
| XM_007233390.3 | mRNA | upstream | 401791 | 7268730 ~ 7326748 (+) | True | vopp1 |
| XM_007238663.3 | mRNA | upstream | 1727391 | 5992126 ~ 6001148 (+) | True | LOC103044377 |
| XM_007238662.3 | mRNA | upstream | 1740041 | 5929824 ~ 5988498 (+) | True | LOC103043891 |
| XM_022673422.1 | mRNA | upstream | 1802084 | 5913261 ~ 5926455 (+) | False | LOC103042448 |
| XM_022673348.1 | mRNA | downstream | 28091 | 7763877 ~ 7785181 (+) | True | vps16 |
| XM_007248886.3 | mRNA | downstream | 50536 | 7786322 ~ 7796482 (+) | True | rgn |
| XM_007248885.2 | mRNA | downstream | 61547 | 7797333 ~ 7803815 (+) | True | LOC103027817 |
| XM_022673447.1 | mRNA | downstream | 73230 | 7809016 ~ 7817569 (+) | True | LOC111193321 |
| XM_007243193.3 | mRNA | downstream | 83245 | 7819031 ~ 7828733 (+) | True | LOC103042672 |
| TU119517 | other | upstream | 148579 | 7578610 ~ 7579960 (+) | True | G88849 |
| trnap-agg_3 | other | upstream | 485562 | 7242906 ~ 7242977 (+) | True | trnap-agg_3 |
| TU119113 | other | upstream | 2604813 | 4911656 ~ 5123726 (+) | False | pard3 |
| TU119068 | other | upstream | 2921866 | 4796822 ~ 4806673 (+) | True | G88486 |
| TU119049 | other | upstream | 3047702 | 4680113 ~ 4680837 (+) | True | G88473 |
| TU119784 | other | downstream | 510428 | 8246214 ~ 8249434 (+) | False | sumo1 |
| TU120304 | other | downstream | 1866985 | 9602771 ~ 9610254 (+) | True | G89453 |
| TU120818 | other | downstream | 2949871 | 10685657 ~ 10686056 (+) | True | G89805 |
| TU120819 | other | downstream | 2952480 | 10688266 ~ 10688820 (+) | True | G89806 |
| TU120940 | other | downstream | 3168858 | 10904644 ~ 10907172 (+) | False | LOC111193328 |
