Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_001518706.2 |
| length | 727 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 3 |
| gene id | LOC107197683 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035906.1 |
| NCBI id | CM008309.1 |
| chromosome length | 35377769 |
| location | 17913111 ~ 17925434 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU123257 | lncRNA | upstream | 234906 | 17677865 ~ 17678205 (+) | True | G91633 |
| TU123252 | lncRNA | upstream | 254000 | 17657096 ~ 17659111 (+) | True | G91628 |
| TU123241 | lncRNA | upstream | 284442 | 17627288 ~ 17628669 (+) | True | G91621 |
| TU123205 | lncRNA | upstream | 326914 | 17585501 ~ 17586197 (+) | True | G91599 |
| TU123202 | lncRNA | upstream | 337327 | 17574544 ~ 17575784 (+) | True | G91597 |
| TU123320 | lncRNA | downstream | 6041 | 17931475 ~ 17931750 (+) | True | G91690 |
| TU123338 | lncRNA | downstream | 134744 | 18060178 ~ 18090208 (+) | True | G91708 |
| TU123353 | lncRNA | downstream | 350722 | 18276156 ~ 18276397 (+) | True | G91721 |
| TU123355 | lncRNA | downstream | 400026 | 18325460 ~ 18325723 (+) | True | G91723 |
| TU123363 | lncRNA | downstream | 422593 | 18348027 ~ 18350465 (+) | False | G91728 |
| XM_022673708.1 | mRNA | upstream | 48036 | 17860580 ~ 17865075 (+) | True | utp11 |
| XM_007251793.3 | mRNA | upstream | 159564 | 17707735 ~ 17753547 (+) | True | rspo1 |
| XM_015606461.2 | mRNA | upstream | 159564 | 17707735 ~ 17753547 (+) | False | rspo1 |
| XM_007251791.3 | mRNA | upstream | 275501 | 17634185 ~ 17637610 (+) | True | dnali1 |
| XM_022673360.1 | mRNA | upstream | 465180 | 17441118 ~ 17447931 (+) | True | rcc1 |
| XM_007251797.3 | mRNA | downstream | 443337 | 18368771 ~ 18374278 (+) | True | rrp15 |
| XM_007251800.3 | mRNA | downstream | 456262 | 18381696 ~ 18416725 (+) | True | tgfb2 |
| XM_007251801.3 | mRNA | downstream | 568925 | 18494359 ~ 18500620 (+) | True | lyplal1 |
| XM_022673713.1 | mRNA | downstream | 628188 | 18553622 ~ 18581597 (+) | False | adcy3 |
| XM_015606466.2 | mRNA | downstream | 630107 | 18555541 ~ 18581597 (+) | False | adcy3 |
| TU123306 | other | upstream | 668 | 17911901 ~ 17912443 (+) | True | G91678 |
| XR_002650442.1 | other | upstream | 1493731 | 16395214 ~ 16419380 (+) | False | trim71 |
| TU122481 | other | upstream | 2630056 | 15281509 ~ 15283055 (+) | False | LOC103025288 |
| TU122479 | other | upstream | 2633947 | 15276253 ~ 15279164 (+) | False | LOC103025288 |
| TU122457 | other | upstream | 2696603 | 15160215 ~ 15216508 (+) | True | alg14 |
| LOC111193302 | other | downstream | 422590 | 18348024 ~ 18350624 (+) | True | LOC111193302 |
| TU123361 | other | downstream | 422593 | 18348027 ~ 18361095 (+) | True | G91728 |
| LOC111193341 | other | downstream | 426529 | 18351963 ~ 18352643 (+) | True | LOC111193341 |
| LOC103024770 | other | downstream | 428729 | 18354163 ~ 18354889 (+) | True | LOC103024770 |
| LOC111193340 | other | downstream | 433489 | 18358923 ~ 18361117 (+) | True | LOC111193340 |
