Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU153744 |
| length | 495 |
| lncRNA type | sense_over |
| GC content | 0.38 |
| exon number | 3 |
| gene id | ctsa |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_035909.1 |
| NCBI id | CM008312.1 |
| chromosome length | 44161018 |
| location | 25635304 ~ 25686577 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU153731 | lncRNA | downstream | 52327 | 25582623 ~ 25582977 (-) | True | G113771 |
| XR_002650694.1 | lncRNA | downstream | 60835 | 25568337 ~ 25574469 (-) | False | LOC111193751 |
| TU153725 | lncRNA | downstream | 63018 | 25569989 ~ 25572286 (-) | False | LOC111193751 |
| TU153730 | lncRNA | downstream | 63833 | 25568088 ~ 25571471 (-) | True | LOC111193751 |
| TU153721 | lncRNA | downstream | 71899 | 25561295 ~ 25563405 (-) | True | G113767 |
| TU153788 | lncRNA | upstream | 318945 | 26005522 ~ 26007995 (-) | True | G113818 |
| XR_002650626.1 | lncRNA | upstream | 389462 | 26076039 ~ 26076705 (-) | True | LOC111193689 |
| TU153853 | lncRNA | upstream | 576285 | 26262862 ~ 26263175 (-) | True | G113865 |
| TU153884 | lncRNA | upstream | 657594 | 26344171 ~ 26386866 (-) | True | G113887 |
| TU153897 | lncRNA | upstream | 795037 | 26481614 ~ 26481831 (-) | True | G113899 |
| XM_007252151.3 | mRNA | downstream | 54378 | 25578698 ~ 25580926 (-) | True | LOC103025798 |
| XM_007252144.3 | mRNA | downstream | 121817 | 25489609 ~ 25513487 (-) | True | cygb |
| XM_007252143.3 | mRNA | downstream | 188402 | 25404994 ~ 25446902 (-) | True | sphk1 |
| XM_022675598.1 | mRNA | downstream | 306276 | 25321896 ~ 25329028 (-) | True | aanat |
| XM_007252138.3 | mRNA | downstream | 425993 | 25205651 ~ 25209311 (-) | True | ten1 |
| XM_022675607.1 | mRNA | upstream | 24654 | 25711231 ~ 26019447 (-) | True | LOC103035347 |
| XM_022675609.1 | mRNA | upstream | 24654 | 25711231 ~ 25889662 (-) | False | LOC103035347 |
| XM_022675608.1 | mRNA | upstream | 24654 | 25711231 ~ 25889662 (-) | False | LOC103035347 |
| XM_022675611.1 | mRNA | upstream | 405074 | 26091651 ~ 26101521 (-) | True | LOC103030576 |
| XM_022675612.1 | mRNA | upstream | 465870 | 26152447 ~ 26206570 (-) | True | eya2 |
| trnar-ccg_1 | other | downstream | 633548 | 25001684 ~ 25001756 (-) | True | trnar-ccg_1 |
| TU153097 | other | downstream | 1733806 | 23901123 ~ 23901498 (-) | True | G113304 |
| TU153063 | other | downstream | 1841843 | 23735954 ~ 23793461 (-) | True | G113276 |
| TU152964 | other | downstream | 2082240 | 23552349 ~ 23553064 (-) | True | G113190 |
| TU152923 | other | downstream | 2323318 | 23299228 ~ 23311986 (-) | False | LOC103039435 |
| TU153804 | other | upstream | 346318 | 26032895 ~ 26062284 (-) | True | G113826 |
| TU153885 | other | upstream | 659563 | 26346140 ~ 26393197 (-) | True | G113888 |
| XR_002650695.1 | other | upstream | 1630831 | 27317408 ~ 27319945 (-) | True | LOC111193752 |
| TU154209 | other | upstream | 2438659 | 28125236 ~ 28129856 (-) | True | G114134 |
| TU154457 | other | upstream | 2661688 | 28348265 ~ 28361481 (-) | True | G114270 |
