RNA id: TU81917



Basic Information


Item Value
RNA id TU81917
length 664
lncRNA type inter_gene
GC content 0.70
exon number 1
gene id G60736
representative True

Chromosome Information


Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 51765116 ~ 51765779 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


CTGCCGCCGCCGCTTGCTGAGACCCGGCCCAGAGCAGCAGCTGCCGATAGTGCCCCCACAGCCCACCACGCCGCCCGCTAGCTCCCCGCGACCGCCGGACACGCAGCTAATCCCGCCCAGACCGCCTCCGTCCCCCGGGCCGGCGGGGGATCCAGCTCCCACCGGCGGAGGGGAGGCCTGCTGCGGCCGCGAGCTCGATTCATTCCGCCTGTCCTCCCTGGACTGAGGCGGCGCGGCTTGATATGACCACGGCGGCGGTGAAGCTCTAGGCCTCGCCCCGGTCCGCACAACGCCGTGGCCGTGCTGGTGAGGGTCGGAGCCGGCTCGCCTGTCGCTCTCGTCGGCGTGGTCCTGGACCCCGACCGTGGAGCTCGGCTTCTTCTTGGGCAGGATCGTCATGTTGGCTGTGTGTGCGCGGAGGGCAGGGAGGGGGGAGcgggaagaggaggaggggggtcAGGGGTGACGAGTCCTCCGGCTCGGGGAGAGCTCTGCGCCGCCCGTGCTTCAGCCTGGCCGTCTTCTCTGGACCGAGGGCTCCTCCCTGGAGGTTTCGGGAAAGGTAAGGCGTCGTTTTTGTGGGTAAAAAGCGCCGCGGAGAGAACAAAAACAGCCCGAGTCTCCGCCGCCGCCGAGCCGCCACTGCTGGAGCTTCCCCTCCGCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU81748 lncRNA downstream 50950 51713187 ~ 51714166 (-) True G60629
TU81747 lncRNA downstream 52024 51712617 ~ 51713092 (-) True G60628
TU81735 lncRNA downstream 117421 51645221 ~ 51647695 (-) True G60619
TU81738 lncRNA downstream 117421 51646848 ~ 51647695 (-) False G60619
TU81703 lncRNA downstream 184482 51539498 ~ 51580634 (-) True LOC103045940
TU81920 lncRNA upstream 81006 51846785 ~ 51848839 (-) True G60739
TU81938 lncRNA upstream 83848 51849627 ~ 51850048 (-) True G60752
TU81939 lncRNA upstream 84610 51850389 ~ 51851299 (-) True G60753
TU81930 lncRNA upstream 119784 51885563 ~ 51900112 (-) True G60747
TU81931 lncRNA upstream 130088 51895867 ~ 51900112 (-) False G60747
XM_007245847.3 mRNA downstream 102276 51657401 ~ 51662840 (-) True LOC103034245
XM_022670873.1 mRNA downstream 148742 51602312 ~ 51616374 (-) True abtb1
XM_022670872.1 mRNA downstream 187956 51543106 ~ 51577160 (-) False LOC103045940
XM_022670871.1 mRNA downstream 187956 51543106 ~ 51577160 (-) False LOC103045940
XM_022670869.1 mRNA downstream 293258 51461093 ~ 51471858 (-) False LOC103032967
XM_007245855.3 mRNA upstream 137445 51903224 ~ 51973896 (-) True slc6a8
XM_022670882.1 mRNA upstream 283847 52049626 ~ 52063200 (-) True LOC103025058
XM_022670883.1 mRNA upstream 283847 52049626 ~ 52056448 (-) False LOC103025058
XM_022670881.1 mRNA upstream 283847 52049626 ~ 52056446 (-) False LOC103025058
XM_007245817.3 mRNA upstream 366152 52131931 ~ 52153152 (-) False LOC103025375
TU81746 other downstream 57004 51706338 ~ 51708112 (-) True G60627
TU81451 other downstream 932916 50827695 ~ 50832200 (-) True G60441
TU80777 other downstream 2459864 49304608 ~ 49305252 (-) True G59951
TU80719 other downstream 2681183 49062621 ~ 49083933 (-) False LOC103030200
TU80461 other downstream 3845735 47843007 ~ 47919381 (-) False selenok

Expression Profile