RNA id: TCONS_00013148


Basic Information

Item Value
RNA id TCONS_00013148
length 803
RNA type mRNA
GC content 0.41
exon number 5
gene id XLOC_006834
representative False

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 37617518 ~ 37620290 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AGCAAACGTCGCTGCAGGTCTAACATTTGCTATAGTTCTTACATTCGTCTAACATCTAGCCTATCTGAATTCATTCAGTTCAAACCCCAAGACTCTACTGAAAATGGGTCTACTTACAGCCGCCGTAGCTGTCGCAGGAGGAGCCGGAGCAATTGCTGCAGCTCCTGTAGTTCTAACAGCTGTAGGTTTCACTGGAGCTGGAATTGCTGCGGGTTCGATTGCCTCCTCAATGATGTCAGCTGCTGCTGTAGCAAACGGAGGAGGAGTTGCGGCTGGATCAGTGGTAGCAGGTCTTCAAGCAGCTGgtgCTGCTGGAATCCCTGCCGCAGCTCAGGCTGTTATTGGTGGCATAGGGGCTGCGGCTAGCACTCTTGGGTGGTTTGCTCTTATTTAGATTGTTCTTCAGTAGCTGCAGGTGCTGCAGCAGGCGAAGCCAGAACTGTGGAAGTCGCTGTGAGAATAGTTGATACTGCCTGACATGCCCTTCACTATATGataaatttctatttatttaatcaaacataTAGCATTTAACTAATCCACAGCCATAAATGTAGACATGTACTAACTCCttcaaaatattacaataaatctATATTTCTTCACCTTTTACTTTAAACTTGTACTACAAATATTATTTGCTCTTGTTATAAGTTGTgtggtaaaacaaaacaatatcttCTTTTAAGCAAGATGAGATTCAAATCCTATCTTAAGATGAGAGTTTTGTTTCTTGTCTTGGTAAATGTTTTGgaactgttaaaaataaatcaataaataaattgattacattttttgGTAAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000018064

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00013144 lncRNA downstream 2541 37609804 ~ 37614979 (-) True XLOC_006833
TCONS_00013145 lncRNA downstream 4489 37609804 ~ 37613031 (-) False XLOC_006833
TCONS_00013142 lncRNA downstream 9148 37607057 ~ 37608372 (-) True XLOC_006832
TCONS_00013874 lncRNA downstream 81735 37528161 ~ 37535785 (-) True XLOC_006829
TCONS_00013135 lncRNA downstream 82096 37528161 ~ 37535424 (-) False XLOC_006829
TCONS_00013876 lncRNA upstream 12336 37632626 ~ 37636598 (-) False XLOC_006836
TCONS_00013875 lncRNA upstream 12336 37632626 ~ 37636598 (-) False XLOC_006836
TCONS_00013161 lncRNA upstream 570231 38190521 ~ 38195214 (-) True XLOC_006842
TCONS_00013877 lncRNA upstream 992935 38613225 ~ 38619719 (-) True XLOC_006843
TCONS_00013163 lncRNA upstream 1043540 38663830 ~ 38666293 (-) False XLOC_006844
TCONS_00013143 mRNA downstream 2491 37609458 ~ 37615029 (-) False XLOC_006833
TCONS_00013141 mRNA downstream 9079 37605896 ~ 37608441 (-) False XLOC_006832
TCONS_00013138 mRNA downstream 16920 37586491 ~ 37600600 (-) False XLOC_006831
TCONS_00013137 mRNA downstream 72033 37543498 ~ 37545487 (-) True XLOC_006830
TCONS_00013134 mRNA downstream 97703 37493729 ~ 37519817 (-) True XLOC_006828
TCONS_00013150 mRNA upstream 2986 37623276 ~ 37631092 (-) True XLOC_006835
TCONS_00013151 mRNA upstream 13614 37633904 ~ 37636147 (-) True XLOC_006836
TCONS_00013152 mRNA upstream 18468 37638758 ~ 37642890 (-) False XLOC_006837
TCONS_00013153 mRNA upstream 18474 37638764 ~ 37642893 (-) False XLOC_006837
TCONS_00013154 mRNA upstream 18480 37638770 ~ 37642901 (-) True XLOC_006837
TCONS_00013139 other downstream 16981 37594515 ~ 37600539 (-) False XLOC_006831
TCONS_00013140 other downstream 18275 37598711 ~ 37599245 (-) True XLOC_006831
TCONS_00013121 other downstream 438804 37178602 ~ 37178716 (-) True XLOC_006819
TCONS_00013107 other downstream 856204 36757555 ~ 36761316 (-) True XLOC_006809
TCONS_00013090 other downstream 1082448 36530420 ~ 36535072 (-) False XLOC_006800
TCONS_00013157 other upstream 30383 37650673 ~ 37656690 (-) False XLOC_006839
TCONS_00013167 other upstream 1232847 38853137 ~ 38853252 (-) True XLOC_006846
TCONS_00013170 other upstream 1622265 39242555 ~ 39242672 (-) True XLOC_006848
TCONS_00013199 other upstream 3610003 41230293 ~ 41230409 (-) True XLOC_006866
TCONS_00013200 other upstream 4042682 41662972 ~ 41663088 (-) True XLOC_006867

Expression Profile

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