RNA id: TU36578



Basic Information


Item Value
RNA id TU36578
length 212
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G32240
representative True

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 11991608 ~ 11991819 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TTTAAAGGGATAATACATCACAAAATGGGTTTGTTCCAAACCTGTATGCCTTTTTAATCTGTTGAAGACAAGAGAACATTTTTGAAGAATGTTTTTATCCAATATATTTTTATCCAATTTTTATACAATAATAGTAAGTGGGGTCCAACACATAATTGAACCTGATTTTCATTGTATAGACAATAAAAACACATAGACACACACACATACAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36577 lncRNA downstream 3781 11987529 ~ 11987827 (-) True G32239
TU36576 lncRNA downstream 5798 11985549 ~ 11985810 (-) True G32238
TU36575 lncRNA downstream 6180 11985217 ~ 11985428 (-) True G32237
TU36569 lncRNA downstream 30230 11961179 ~ 11961378 (-) True G32231
TU36568 lncRNA downstream 30999 11960372 ~ 11960609 (-) True G32230
TU36594 lncRNA upstream 174709 12166528 ~ 12166744 (-) True G32256
TU36490 lncRNA upstream 186124 12177943 ~ 12179824 (-) True G32177
TU36597 lncRNA upstream 204554 12196373 ~ 12197128 (-) True G32258
TU36494 lncRNA upstream 276068 12267887 ~ 12322118 (-) False G32179
TU36495 lncRNA upstream 276068 12267887 ~ 12322118 (-) False G32179
CI01000004_11974708_11980518.mRNA mRNA downstream 9313 11974644 ~ 11982295 (-) True CI01000004_11974708_11980518
CI01000004_11944095_11946749.mRNA mRNA downstream 44592 11943785 ~ 11947016 (-) True CI01000004_11944095_11946749
CI01000004_11930044_11933982.mRNA mRNA downstream 57452 11929840 ~ 11934156 (-) True CI01000004_11930044_11933982
CI01000004_11826038_11848540.mRNA mRNA downstream 143068 11824907 ~ 11848540 (-) True CI01000004_11826038_11848540
CI01000004_11789063_11823381.mRNA mRNA downstream 166868 11788496 ~ 11824740 (-) True CI01000004_11789063_11823381
CI01000004_12025107_12032154.mRNA mRNA upstream 33288 12025107 ~ 12032952 (-) True CI01000004_12025107_12032154
CI01000004_12048597_12107143.mRNA mRNA upstream 55500 12047319 ~ 12108201 (-) True CI01000004_12048597_12107143
CI01000004_12111607_12123001.mRNA mRNA upstream 119073 12110892 ~ 12123318 (-) True CI01000004_12111607_12123001
CI01000004_12127993_12144790.mRNA mRNA upstream 134781 12126600 ~ 12144790 (-) True CI01000004_12127993_12144790
CI01000004_12170772_12177138.mRNA mRNA upstream 178698 12170517 ~ 12177138 (-) True CI01000004_12170772_12177138
TU36455 other downstream 210657 11776519 ~ 11780951 (-) True G32150
TU36279 other downstream 578701 11407465 ~ 11412907 (-) True CI01000004_11407198_11412220
TU35313 other downstream 1240967 10746437 ~ 10750641 (-) True G31203
TU34309 other downstream 2584687 9377937 ~ 9406921 (-) True G30316
TU33670 other downstream 3633481 8354498 ~ 8358127 (-) True G29746
TU36531 other upstream 384349 12376168 ~ 12384780 (-) True G32207
TU38237 other upstream 2558981 14550800 ~ 14551284 (-) True CI01000004_14543631_14551256
TU38247 other upstream 2576974 14568793 ~ 14569264 (-) True G33746
TU38255 other upstream 2586639 14578458 ~ 14579001 (-) True G33750
TU38261 other upstream 2589587 14581406 ~ 14581873 (-) True G33755

Expression Profile